Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.87■□□□□ 0.93
ERCC1P07992 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ERCC1P07992 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ERCC1P07992 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
ERCC1P07992 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
ERCC1P07992 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ERCC1P07992 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
ERCC1P07992 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ERCC1P07992 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ERCC1P07992 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
ERCC1P07992 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ERCC1P07992 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ERCC1P07992 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.86■□□□□ 0.93
ERCC1P07992 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.86■□□□□ 0.93
ERCC1P07992 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ERCC1P07992 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
ERCC1P07992 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ERCC1P07992 AL359504.2-201ENST00000605506 1601 ntBASIC20.86■□□□□ 0.93
ERCC1P07992 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ERCC1P07992 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
ERCC1P07992 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ERCC1P07992 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
ERCC1P07992 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.85■□□□□ 0.93
ERCC1P07992 AC129492.7-201ENST00000622992 756 ntBASIC20.85■□□□□ 0.93
ERCC1P07992 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ERCC1P07992 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.85■□□□□ 0.93
ERCC1P07992 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
ERCC1P07992 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ERCC1P07992 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
ERCC1P07992 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ERCC1P07992 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
ERCC1P07992 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ERCC1P07992 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
ERCC1P07992 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ERCC1P07992 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.84■□□□□ 0.93
ERCC1P07992 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.84■□□□□ 0.93
ERCC1P07992 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.84■□□□□ 0.93
ERCC1P07992 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
ERCC1P07992 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
ERCC1P07992 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.84■□□□□ 0.93
ERCC1P07992 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.84■□□□□ 0.93
ERCC1P07992 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
ERCC1P07992 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
ERCC1P07992 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ERCC1P07992 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ERCC1P07992 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ERCC1P07992 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.83■□□□□ 0.93
ERCC1P07992 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
ERCC1P07992 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ERCC1P07992 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ERCC1P07992 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
ERCC1P07992 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
ERCC1P07992 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ERCC1P07992 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.82■□□□□ 0.92
ERCC1P07992 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.82■□□□□ 0.92
ERCC1P07992 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.82■□□□□ 0.92
ERCC1P07992 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ERCC1P07992 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.82■□□□□ 0.92
ERCC1P07992 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ERCC1P07992 AC018755.3-202ENST00000596210 929 ntBASIC20.81■□□□□ 0.92
ERCC1P07992 RAP2CP1-202ENST00000605179 643 ntBASIC20.81■□□□□ 0.92
ERCC1P07992 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.81■□□□□ 0.92
ERCC1P07992 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ERCC1P07992 AC022211.4-201ENST00000625094 2161 ntBASIC20.8■□□□□ 0.92
ERCC1P07992 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ERCC1P07992 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ERCC1P07992 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ERCC1P07992 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.8■□□□□ 0.92
ERCC1P07992 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.8■□□□□ 0.92
ERCC1P07992 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.8■□□□□ 0.92
ERCC1P07992 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ERCC1P07992 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ERCC1P07992 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
ERCC1P07992 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.79■□□□□ 0.92
ERCC1P07992 BHLHE23-202ENST00000612929 1109 ntBASIC20.79■□□□□ 0.92
ERCC1P07992 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ERCC1P07992 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ERCC1P07992 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ERCC1P07992 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ERCC1P07992 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ERCC1P07992 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.78■□□□□ 0.92
ERCC1P07992 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ERCC1P07992 AC096887.2-201ENST00000623443 1957 ntBASIC20.78■□□□□ 0.92
ERCC1P07992 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
ERCC1P07992 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
ERCC1P07992 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ERCC1P07992 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ERCC1P07992 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
ERCC1P07992 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ERCC1P07992 DUX4L18-201ENST00000553347 1267 ntBASIC20.78■□□□□ 0.92
ERCC1P07992 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
ERCC1P07992 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
ERCC1P07992 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ERCC1P07992 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ERCC1P07992 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ERCC1P07992 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ERCC1P07992 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.77■□□□□ 0.92
ERCC1P07992 MIR6765-201ENST00000614092 87 ntBASIC20.77■□□□□ 0.92
ERCC1P07992 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ERCC1P07992 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms