Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTSDP07339 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.66■□□□□ 0.74
CTSDP07339 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CTSDP07339 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CTSDP07339 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.65■□□□□ 0.74
CTSDP07339 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CTSDP07339 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.65■□□□□ 0.74
CTSDP07339 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CTSDP07339 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CTSDP07339 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTSDP07339 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTSDP07339 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CTSDP07339 DUSP8P5-201ENST00000422884 1815 ntBASIC19.65■□□□□ 0.74
CTSDP07339 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CTSDP07339 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
CTSDP07339 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
CTSDP07339 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTSDP07339 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTSDP07339 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CTSDP07339 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTSDP07339 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTSDP07339 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.64■□□□□ 0.73
CTSDP07339 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTSDP07339 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTSDP07339 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTSDP07339 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTSDP07339 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTSDP07339 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CTSDP07339 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTSDP07339 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTSDP07339 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTSDP07339 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CTSDP07339 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CTSDP07339 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.62■□□□□ 0.73
CTSDP07339 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTSDP07339 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CTSDP07339 CHST11-202ENST00000546689 756 ntTSL 2 BASIC19.62■□□□□ 0.73
CTSDP07339 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.62■□□□□ 0.73
CTSDP07339 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CTSDP07339 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTSDP07339 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTSDP07339 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CTSDP07339 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTSDP07339 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.62■□□□□ 0.73
CTSDP07339 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CTSDP07339 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTSDP07339 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CTSDP07339 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTSDP07339 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CTSDP07339 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTSDP07339 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTSDP07339 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTSDP07339 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC19.61■□□□□ 0.73
CTSDP07339 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTSDP07339 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CTSDP07339 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTSDP07339 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CTSDP07339 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTSDP07339 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.6■□□□□ 0.73
CTSDP07339 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CTSDP07339 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CTSDP07339 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTSDP07339 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CTSDP07339 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTSDP07339 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTSDP07339 LINC01971-201ENST00000617888 1048 ntBASIC19.6■□□□□ 0.73
CTSDP07339 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CTSDP07339 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CTSDP07339 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CTSDP07339 AC079834.2-201ENST00000609776 1949 ntBASIC19.59■□□□□ 0.73
CTSDP07339 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CTSDP07339 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTSDP07339 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC19.59■□□□□ 0.73
CTSDP07339 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTSDP07339 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.59■□□□□ 0.73
CTSDP07339 DUX4L13-201ENST00000554103 1267 ntBASIC19.59■□□□□ 0.73
CTSDP07339 DUX4L15-201ENST00000611059 1267 ntBASIC19.59■□□□□ 0.73
CTSDP07339 DUX4L23-201ENST00000615195 1269 ntBASIC19.59■□□□□ 0.73
CTSDP07339 DUX4L24-201ENST00000617576 1269 ntBASIC19.59■□□□□ 0.73
CTSDP07339 DUX4L22-201ENST00000618238 1269 ntBASIC19.59■□□□□ 0.73
CTSDP07339 DUX4L20-201ENST00000619712 1269 ntBASIC19.59■□□□□ 0.73
CTSDP07339 DUX4L21-201ENST00000622058 1269 ntBASIC19.59■□□□□ 0.73
CTSDP07339 DUX4L10-201ENST00000622460 1267 ntBASIC19.59■□□□□ 0.73
CTSDP07339 DUX4L25-201ENST00000624915 1269 ntBASIC19.59■□□□□ 0.73
CTSDP07339 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CTSDP07339 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTSDP07339 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTSDP07339 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTSDP07339 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CTSDP07339 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
CTSDP07339 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CTSDP07339 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.58■□□□□ 0.73
CTSDP07339 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CTSDP07339 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CTSDP07339 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CTSDP07339 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
CTSDP07339 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CTSDP07339 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CTSDP07339 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTSDP07339 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms