Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
ATP2A1O14983 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
ATP2A1O14983 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
ATP2A1O14983 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC27.4■■□□□ 1.98
ATP2A1O14983 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
ATP2A1O14983 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC27.39■■□□□ 1.98
ATP2A1O14983 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
ATP2A1O14983 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
ATP2A1O14983 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
ATP2A1O14983 UNC93B8-201ENST00000511903 705 ntBASIC27.38■■□□□ 1.97
ATP2A1O14983 MIR4281-201ENST00000580852 62 ntBASIC27.38■■□□□ 1.97
ATP2A1O14983 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
ATP2A1O14983 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC27.38■■□□□ 1.97
ATP2A1O14983 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
ATP2A1O14983 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC27.37■■□□□ 1.97
ATP2A1O14983 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
ATP2A1O14983 AC011551.1-201ENST00000614101 683 ntBASIC27.37■■□□□ 1.97
ATP2A1O14983 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
ATP2A1O14983 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.97
ATP2A1O14983 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
ATP2A1O14983 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
ATP2A1O14983 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC27.36■■□□□ 1.97
ATP2A1O14983 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC27.36■■□□□ 1.97
ATP2A1O14983 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
ATP2A1O14983 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC27.36■■□□□ 1.97
ATP2A1O14983 GRAMD4P7-201ENST00000578182 1232 ntBASIC27.36■■□□□ 1.97
ATP2A1O14983 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
ATP2A1O14983 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC27.35■■□□□ 1.97
ATP2A1O14983 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC27.34■■□□□ 1.97
ATP2A1O14983 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC27.34■■□□□ 1.97
ATP2A1O14983 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC27.34■■□□□ 1.97
ATP2A1O14983 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC27.34■■□□□ 1.97
ATP2A1O14983 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC27.34■■□□□ 1.97
ATP2A1O14983 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC27.34■■□□□ 1.97
ATP2A1O14983 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
ATP2A1O14983 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
ATP2A1O14983 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC27.33■■□□□ 1.97
ATP2A1O14983 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
ATP2A1O14983 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
ATP2A1O14983 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
ATP2A1O14983 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
ATP2A1O14983 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC27.33■■□□□ 1.97
ATP2A1O14983 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC27.33■■□□□ 1.97
ATP2A1O14983 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC27.33■■□□□ 1.97
ATP2A1O14983 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
ATP2A1O14983 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
ATP2A1O14983 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
ATP2A1O14983 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
ATP2A1O14983 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
ATP2A1O14983 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
ATP2A1O14983 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
ATP2A1O14983 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC27.31■■□□□ 1.96
ATP2A1O14983 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC27.31■■□□□ 1.96
ATP2A1O14983 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC27.31■■□□□ 1.96
ATP2A1O14983 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
ATP2A1O14983 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
ATP2A1O14983 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC27.3■■□□□ 1.96
ATP2A1O14983 AC092028.1-203ENST00000608262 953 ntBASIC27.3■■□□□ 1.96
ATP2A1O14983 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC27.3■■□□□ 1.96
ATP2A1O14983 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
ATP2A1O14983 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC27.29■■□□□ 1.96
ATP2A1O14983 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC27.29■■□□□ 1.96
ATP2A1O14983 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC27.29■■□□□ 1.96
ATP2A1O14983 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
ATP2A1O14983 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
ATP2A1O14983 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
ATP2A1O14983 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC27.28■■□□□ 1.96
ATP2A1O14983 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
ATP2A1O14983 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC27.28■■□□□ 1.96
ATP2A1O14983 SSSCA1-AS1-201ENST00000567594 614 ntBASIC27.28■■□□□ 1.96
ATP2A1O14983 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC27.28■■□□□ 1.96
ATP2A1O14983 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC27.28■■□□□ 1.96
ATP2A1O14983 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC27.27■■□□□ 1.96
ATP2A1O14983 KRT16P3-201ENST00000439127 1283 ntBASIC27.27■■□□□ 1.96
ATP2A1O14983 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC27.27■■□□□ 1.96
ATP2A1O14983 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC27.27■■□□□ 1.96
ATP2A1O14983 GAK-223ENST00000628912 497 ntTSL 5 BASIC27.27■■□□□ 1.96
ATP2A1O14983 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
ATP2A1O14983 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
ATP2A1O14983 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
ATP2A1O14983 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC27.26■■□□□ 1.95
ATP2A1O14983 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC27.26■■□□□ 1.95
ATP2A1O14983 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC27.26■■□□□ 1.95
ATP2A1O14983 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC27.26■■□□□ 1.95
ATP2A1O14983 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
ATP2A1O14983 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
ATP2A1O14983 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
ATP2A1O14983 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC27.25■■□□□ 1.95
ATP2A1O14983 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
ATP2A1O14983 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC27.25■■□□□ 1.95
ATP2A1O14983 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
ATP2A1O14983 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC27.24■■□□□ 1.95
ATP2A1O14983 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC27.24■■□□□ 1.95
ATP2A1O14983 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
ATP2A1O14983 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC27.24■■□□□ 1.95
ATP2A1O14983 MTURN-203ENST00000409688 843 ntTSL 2 BASIC27.24■■□□□ 1.95
ATP2A1O14983 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC27.24■■□□□ 1.95
ATP2A1O14983 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
ATP2A1O14983 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC27.24■■□□□ 1.95
ATP2A1O14983 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms