Protein–RNA interactions for Protein: A6NHT5

HMX3, Homeobox protein HMX3, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMX3A6NHT5 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.48■□□□□ 0.87
HMX3A6NHT5 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HMX3A6NHT5 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
HMX3A6NHT5 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HMX3A6NHT5 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HMX3A6NHT5 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HMX3A6NHT5 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HMX3A6NHT5 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HMX3A6NHT5 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20.47■□□□□ 0.87
HMX3A6NHT5 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.47■□□□□ 0.87
HMX3A6NHT5 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HMX3A6NHT5 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HMX3A6NHT5 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HMX3A6NHT5 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
HMX3A6NHT5 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.47■□□□□ 0.87
HMX3A6NHT5 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
HMX3A6NHT5 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HMX3A6NHT5 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HMX3A6NHT5 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.46■□□□□ 0.87
HMX3A6NHT5 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.46■□□□□ 0.87
HMX3A6NHT5 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HMX3A6NHT5 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HMX3A6NHT5 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HMX3A6NHT5 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HMX3A6NHT5 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
HMX3A6NHT5 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
HMX3A6NHT5 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HMX3A6NHT5 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HMX3A6NHT5 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
HMX3A6NHT5 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.45■□□□□ 0.86
HMX3A6NHT5 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HMX3A6NHT5 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HMX3A6NHT5 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HMX3A6NHT5 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
HMX3A6NHT5 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
HMX3A6NHT5 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HMX3A6NHT5 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HMX3A6NHT5 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HMX3A6NHT5 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HMX3A6NHT5 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HMX3A6NHT5 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
HMX3A6NHT5 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
HMX3A6NHT5 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
HMX3A6NHT5 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.44■□□□□ 0.86
HMX3A6NHT5 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.44■□□□□ 0.86
HMX3A6NHT5 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.44■□□□□ 0.86
HMX3A6NHT5 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HMX3A6NHT5 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.44■□□□□ 0.86
HMX3A6NHT5 WHAMMP2-203ENST00000563942 1603 ntBASIC20.44■□□□□ 0.86
HMX3A6NHT5 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
HMX3A6NHT5 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
HMX3A6NHT5 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMX3A6NHT5 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.43■□□□□ 0.86
HMX3A6NHT5 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMX3A6NHT5 MIR3665-201ENST00000578708 105 ntBASIC20.43■□□□□ 0.86
HMX3A6NHT5 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HMX3A6NHT5 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.43■□□□□ 0.86
HMX3A6NHT5 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
HMX3A6NHT5 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMX3A6NHT5 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMX3A6NHT5 EP400NL-214ENST00000641289 2402 ntBASIC20.43■□□□□ 0.86
HMX3A6NHT5 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMX3A6NHT5 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HMX3A6NHT5 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.42■□□□□ 0.86
HMX3A6NHT5 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HMX3A6NHT5 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
HMX3A6NHT5 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HMX3A6NHT5 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HMX3A6NHT5 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.42■□□□□ 0.86
HMX3A6NHT5 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
HMX3A6NHT5 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HMX3A6NHT5 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
HMX3A6NHT5 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HMX3A6NHT5 MIR6090-201ENST00000622481 60 ntBASIC20.41■□□□□ 0.86
HMX3A6NHT5 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
HMX3A6NHT5 AC141586.4-201ENST00000624558 1573 ntBASIC20.41■□□□□ 0.86
HMX3A6NHT5 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HMX3A6NHT5 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
HMX3A6NHT5 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HMX3A6NHT5 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.41■□□□□ 0.86
HMX3A6NHT5 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
HMX3A6NHT5 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HMX3A6NHT5 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
HMX3A6NHT5 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
HMX3A6NHT5 AC108673.1-201ENST00000510422 1159 ntBASIC20.4■□□□□ 0.86
HMX3A6NHT5 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HMX3A6NHT5 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
HMX3A6NHT5 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.4■□□□□ 0.86
HMX3A6NHT5 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HMX3A6NHT5 C1orf229-201ENST00000623686 2258 ntBASIC20.39■□□□□ 0.86
HMX3A6NHT5 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
HMX3A6NHT5 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HMX3A6NHT5 AP006261.1-201ENST00000584783 668 ntBASIC20.39■□□□□ 0.85
HMX3A6NHT5 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HMX3A6NHT5 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.39■□□□□ 0.85
HMX3A6NHT5 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HMX3A6NHT5 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HMX3A6NHT5 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
HMX3A6NHT5 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.38■□□□□ 0.85
HMX3A6NHT5 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms