Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
HRH3Q9Y5N1 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.98■■□□□ 1.11
HRH3Q9Y5N1 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HRH3Q9Y5N1 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.97■■□□□ 1.11
HRH3Q9Y5N1 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.97■■□□□ 1.11
HRH3Q9Y5N1 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.97■■□□□ 1.11
HRH3Q9Y5N1 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HRH3Q9Y5N1 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HRH3Q9Y5N1 AC103834.1-201ENST00000520383 144 ntBASIC21.97■■□□□ 1.11
HRH3Q9Y5N1 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
HRH3Q9Y5N1 KRT8P33-201ENST00000508125 1423 ntBASIC21.97■■□□□ 1.11
HRH3Q9Y5N1 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.96■■□□□ 1.11
HRH3Q9Y5N1 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
HRH3Q9Y5N1 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
HRH3Q9Y5N1 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.96■■□□□ 1.11
HRH3Q9Y5N1 AL035685.1-201ENST00000636663 812 ntBASIC21.96■■□□□ 1.11
HRH3Q9Y5N1 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
HRH3Q9Y5N1 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.96■■□□□ 1.11
HRH3Q9Y5N1 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HRH3Q9Y5N1 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HRH3Q9Y5N1 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HRH3Q9Y5N1 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
HRH3Q9Y5N1 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
HRH3Q9Y5N1 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
HRH3Q9Y5N1 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.95■■□□□ 1.1
HRH3Q9Y5N1 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
HRH3Q9Y5N1 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.95■■□□□ 1.1
HRH3Q9Y5N1 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.95■■□□□ 1.1
HRH3Q9Y5N1 AC018755.3-202ENST00000596210 929 ntBASIC21.95■■□□□ 1.1
HRH3Q9Y5N1 AC074183.2-201ENST00000623112 922 ntBASIC21.95■■□□□ 1.1
HRH3Q9Y5N1 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
HRH3Q9Y5N1 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HRH3Q9Y5N1 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.95■■□□□ 1.1
HRH3Q9Y5N1 AC092803.2-201ENST00000564287 1899 ntBASIC21.94■■□□□ 1.1
HRH3Q9Y5N1 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HRH3Q9Y5N1 AC096887.2-201ENST00000623443 1957 ntBASIC21.94■■□□□ 1.1
HRH3Q9Y5N1 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.94■■□□□ 1.1
HRH3Q9Y5N1 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HRH3Q9Y5N1 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HRH3Q9Y5N1 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.94■■□□□ 1.1
HRH3Q9Y5N1 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.94■■□□□ 1.1
HRH3Q9Y5N1 AC091060.1-201ENST00000623524 1766 ntBASIC21.94■■□□□ 1.1
HRH3Q9Y5N1 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.94■■□□□ 1.1
HRH3Q9Y5N1 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
HRH3Q9Y5N1 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
HRH3Q9Y5N1 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HRH3Q9Y5N1 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.93■■□□□ 1.1
HRH3Q9Y5N1 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.92■■□□□ 1.1
HRH3Q9Y5N1 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
HRH3Q9Y5N1 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.92■■□□□ 1.1
HRH3Q9Y5N1 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
HRH3Q9Y5N1 AC139795.1-202ENST00000500444 432 ntBASIC21.92■■□□□ 1.1
HRH3Q9Y5N1 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
HRH3Q9Y5N1 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
HRH3Q9Y5N1 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
HRH3Q9Y5N1 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
HRH3Q9Y5N1 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
HRH3Q9Y5N1 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HRH3Q9Y5N1 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HRH3Q9Y5N1 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.91■■□□□ 1.1
HRH3Q9Y5N1 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HRH3Q9Y5N1 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.91■■□□□ 1.1
HRH3Q9Y5N1 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HRH3Q9Y5N1 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HRH3Q9Y5N1 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HRH3Q9Y5N1 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.91■■□□□ 1.1
HRH3Q9Y5N1 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HRH3Q9Y5N1 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.91■■□□□ 1.1
HRH3Q9Y5N1 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HRH3Q9Y5N1 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HRH3Q9Y5N1 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.9■■□□□ 1.1
HRH3Q9Y5N1 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.9■■□□□ 1.1
HRH3Q9Y5N1 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
HRH3Q9Y5N1 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HRH3Q9Y5N1 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.89■■□□□ 1.09
HRH3Q9Y5N1 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.89■■□□□ 1.09
HRH3Q9Y5N1 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.89■■□□□ 1.09
HRH3Q9Y5N1 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HRH3Q9Y5N1 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
HRH3Q9Y5N1 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.89■■□□□ 1.09
HRH3Q9Y5N1 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.09
HRH3Q9Y5N1 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HRH3Q9Y5N1 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.88■■□□□ 1.09
HRH3Q9Y5N1 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.88■■□□□ 1.09
HRH3Q9Y5N1 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
HRH3Q9Y5N1 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
HRH3Q9Y5N1 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HRH3Q9Y5N1 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HRH3Q9Y5N1 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.87■■□□□ 1.09
HRH3Q9Y5N1 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HRH3Q9Y5N1 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
HRH3Q9Y5N1 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
HRH3Q9Y5N1 AC010501.1-201ENST00000606270 1962 ntBASIC21.87■■□□□ 1.09
HRH3Q9Y5N1 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
HRH3Q9Y5N1 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.86■■□□□ 1.09
HRH3Q9Y5N1 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
HRH3Q9Y5N1 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.86■■□□□ 1.09
HRH3Q9Y5N1 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
HRH3Q9Y5N1 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.86■■□□□ 1.09
HRH3Q9Y5N1 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms