Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SPHK1Q9NYA1 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
SPHK1Q9NYA1 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SPHK1Q9NYA1 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
SPHK1Q9NYA1 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
SPHK1Q9NYA1 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
SPHK1Q9NYA1 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.12■■□□□ 1.29
SPHK1Q9NYA1 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC23.11■■□□□ 1.29
SPHK1Q9NYA1 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC23.11■■□□□ 1.29
SPHK1Q9NYA1 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.11■■□□□ 1.29
SPHK1Q9NYA1 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SPHK1Q9NYA1 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC23.11■■□□□ 1.29
SPHK1Q9NYA1 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SPHK1Q9NYA1 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
SPHK1Q9NYA1 PVT1_1.1-201ENST00000615125 194 ntBASIC23.11■■□□□ 1.29
SPHK1Q9NYA1 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SPHK1Q9NYA1 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.1■■□□□ 1.29
SPHK1Q9NYA1 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
SPHK1Q9NYA1 BEX3-202ENST00000372634 753 ntTSL 2 BASIC23.1■■□□□ 1.29
SPHK1Q9NYA1 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
SPHK1Q9NYA1 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
SPHK1Q9NYA1 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SPHK1Q9NYA1 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SPHK1Q9NYA1 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC23.09■■□□□ 1.29
SPHK1Q9NYA1 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SPHK1Q9NYA1 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC23.09■■□□□ 1.29
SPHK1Q9NYA1 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.09■■□□□ 1.29
SPHK1Q9NYA1 KRT18P10-201ENST00000388836 1287 ntBASIC23.08■■□□□ 1.29
SPHK1Q9NYA1 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
SPHK1Q9NYA1 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.08■■□□□ 1.29
SPHK1Q9NYA1 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC23.08■■□□□ 1.28
SPHK1Q9NYA1 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
SPHK1Q9NYA1 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
SPHK1Q9NYA1 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SPHK1Q9NYA1 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SPHK1Q9NYA1 AC074183.2-201ENST00000623112 922 ntBASIC23.07■■□□□ 1.28
SPHK1Q9NYA1 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SPHK1Q9NYA1 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SPHK1Q9NYA1 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
SPHK1Q9NYA1 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC23.06■■□□□ 1.28
SPHK1Q9NYA1 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC23.06■■□□□ 1.28
SPHK1Q9NYA1 DUSP8P4-201ENST00000399538 1761 ntBASIC23.05■■□□□ 1.28
SPHK1Q9NYA1 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SPHK1Q9NYA1 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SPHK1Q9NYA1 LONRF2P2-201ENST00000439212 571 ntBASIC23.05■■□□□ 1.28
SPHK1Q9NYA1 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC23.05■■□□□ 1.28
SPHK1Q9NYA1 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.05■■□□□ 1.28
SPHK1Q9NYA1 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.04■■□□□ 1.28
SPHK1Q9NYA1 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SPHK1Q9NYA1 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SPHK1Q9NYA1 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC23.04■■□□□ 1.28
SPHK1Q9NYA1 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
SPHK1Q9NYA1 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SPHK1Q9NYA1 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
SPHK1Q9NYA1 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SPHK1Q9NYA1 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SPHK1Q9NYA1 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SPHK1Q9NYA1 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
SPHK1Q9NYA1 AC145676.1-201ENST00000514988 2004 ntBASIC23.03■■□□□ 1.28
SPHK1Q9NYA1 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.03■■□□□ 1.28
SPHK1Q9NYA1 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SPHK1Q9NYA1 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC23.03■■□□□ 1.28
SPHK1Q9NYA1 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC23.03■■□□□ 1.28
SPHK1Q9NYA1 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SPHK1Q9NYA1 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.03■■□□□ 1.28
SPHK1Q9NYA1 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
SPHK1Q9NYA1 KRT8P33-201ENST00000508125 1423 ntBASIC23.02■■□□□ 1.28
SPHK1Q9NYA1 IDNK-201ENST00000376417 511 ntTSL 5 BASIC23.02■■□□□ 1.28
SPHK1Q9NYA1 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SPHK1Q9NYA1 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC23.02■■□□□ 1.28
SPHK1Q9NYA1 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC23.02■■□□□ 1.28
SPHK1Q9NYA1 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SPHK1Q9NYA1 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SPHK1Q9NYA1 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC23.01■■□□□ 1.27
SPHK1Q9NYA1 MTX2-204ENST00000443241 799 ntTSL 3 BASIC23.01■■□□□ 1.27
SPHK1Q9NYA1 RARRES2P1-201ENST00000474487 481 ntBASIC23.01■■□□□ 1.27
SPHK1Q9NYA1 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
SPHK1Q9NYA1 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SPHK1Q9NYA1 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC23■■□□□ 1.27
SPHK1Q9NYA1 AC103834.1-201ENST00000520383 144 ntBASIC23■■□□□ 1.27
SPHK1Q9NYA1 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SPHK1Q9NYA1 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC23■■□□□ 1.27
SPHK1Q9NYA1 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC23■■□□□ 1.27
SPHK1Q9NYA1 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC23■■□□□ 1.27
SPHK1Q9NYA1 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC22.99■■□□□ 1.27
SPHK1Q9NYA1 AC019171.1-201ENST00000601251 1056 ntBASIC22.99■■□□□ 1.27
SPHK1Q9NYA1 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SPHK1Q9NYA1 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SPHK1Q9NYA1 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC22.98■■□□□ 1.27
SPHK1Q9NYA1 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
SPHK1Q9NYA1 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC22.98■■□□□ 1.27
SPHK1Q9NYA1 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC22.98■■□□□ 1.27
SPHK1Q9NYA1 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
SPHK1Q9NYA1 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SPHK1Q9NYA1 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SPHK1Q9NYA1 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SPHK1Q9NYA1 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
SPHK1Q9NYA1 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC22.97■■□□□ 1.27
SPHK1Q9NYA1 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
SPHK1Q9NYA1 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC22.97■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms