Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SNX25Q9H3E2 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SNX25Q9H3E2 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SNX25Q9H3E2 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC25.53■■□□□ 1.68
SNX25Q9H3E2 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC25.53■■□□□ 1.68
SNX25Q9H3E2 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SNX25Q9H3E2 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SNX25Q9H3E2 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC25.52■■□□□ 1.68
SNX25Q9H3E2 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC25.52■■□□□ 1.68
SNX25Q9H3E2 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SNX25Q9H3E2 AC010501.1-201ENST00000606270 1962 ntBASIC25.52■■□□□ 1.68
SNX25Q9H3E2 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SNX25Q9H3E2 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
SNX25Q9H3E2 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC25.51■■□□□ 1.67
SNX25Q9H3E2 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
SNX25Q9H3E2 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC25.51■■□□□ 1.67
SNX25Q9H3E2 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC25.51■■□□□ 1.67
SNX25Q9H3E2 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SNX25Q9H3E2 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
SNX25Q9H3E2 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SNX25Q9H3E2 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SNX25Q9H3E2 BEX3-202ENST00000372634 753 ntTSL 2 BASIC25.5■■□□□ 1.67
SNX25Q9H3E2 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC25.5■■□□□ 1.67
SNX25Q9H3E2 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC25.5■■□□□ 1.67
SNX25Q9H3E2 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC25.5■■□□□ 1.67
SNX25Q9H3E2 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
SNX25Q9H3E2 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC25.5■■□□□ 1.67
SNX25Q9H3E2 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
SNX25Q9H3E2 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC25.5■■□□□ 1.67
SNX25Q9H3E2 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC25.5■■□□□ 1.67
SNX25Q9H3E2 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
SNX25Q9H3E2 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SNX25Q9H3E2 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC25.49■■□□□ 1.67
SNX25Q9H3E2 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SNX25Q9H3E2 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
SNX25Q9H3E2 MTX2-204ENST00000443241 799 ntTSL 3 BASIC25.49■■□□□ 1.67
SNX25Q9H3E2 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC25.49■■□□□ 1.67
SNX25Q9H3E2 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
SNX25Q9H3E2 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SNX25Q9H3E2 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SNX25Q9H3E2 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC25.48■■□□□ 1.67
SNX25Q9H3E2 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC25.48■■□□□ 1.67
SNX25Q9H3E2 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC25.48■■□□□ 1.67
SNX25Q9H3E2 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SNX25Q9H3E2 AC091060.1-201ENST00000623524 1766 ntBASIC25.48■■□□□ 1.67
SNX25Q9H3E2 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
SNX25Q9H3E2 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SNX25Q9H3E2 AC096887.2-201ENST00000623443 1957 ntBASIC25.47■■□□□ 1.67
SNX25Q9H3E2 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
SNX25Q9H3E2 LONRF2P2-201ENST00000439212 571 ntBASIC25.47■■□□□ 1.67
SNX25Q9H3E2 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC25.47■■□□□ 1.67
SNX25Q9H3E2 PVT1_1.1-201ENST00000615125 194 ntBASIC25.47■■□□□ 1.67
SNX25Q9H3E2 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
SNX25Q9H3E2 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
SNX25Q9H3E2 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC25.46■■□□□ 1.67
SNX25Q9H3E2 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SNX25Q9H3E2 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
SNX25Q9H3E2 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SNX25Q9H3E2 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC25.46■■□□□ 1.67
SNX25Q9H3E2 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC25.45■■□□□ 1.67
SNX25Q9H3E2 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC25.45■■□□□ 1.66
SNX25Q9H3E2 AC019171.1-201ENST00000601251 1056 ntBASIC25.45■■□□□ 1.66
SNX25Q9H3E2 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC25.45■■□□□ 1.66
SNX25Q9H3E2 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC25.45■■□□□ 1.66
SNX25Q9H3E2 KRT8P33-201ENST00000508125 1423 ntBASIC25.45■■□□□ 1.66
SNX25Q9H3E2 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SNX25Q9H3E2 IDNK-201ENST00000376417 511 ntTSL 5 BASIC25.44■■□□□ 1.66
SNX25Q9H3E2 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SNX25Q9H3E2 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC25.44■■□□□ 1.66
SNX25Q9H3E2 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SNX25Q9H3E2 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
SNX25Q9H3E2 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
SNX25Q9H3E2 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
SNX25Q9H3E2 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC25.43■■□□□ 1.66
SNX25Q9H3E2 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC25.43■■□□□ 1.66
SNX25Q9H3E2 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SNX25Q9H3E2 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC25.43■■□□□ 1.66
SNX25Q9H3E2 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
SNX25Q9H3E2 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
SNX25Q9H3E2 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SNX25Q9H3E2 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
SNX25Q9H3E2 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC25.43■■□□□ 1.66
SNX25Q9H3E2 DUSP8P4-201ENST00000399538 1761 ntBASIC25.42■■□□□ 1.66
SNX25Q9H3E2 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SNX25Q9H3E2 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SNX25Q9H3E2 RARRES2P1-201ENST00000474487 481 ntBASIC25.42■■□□□ 1.66
SNX25Q9H3E2 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC25.42■■□□□ 1.66
SNX25Q9H3E2 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
SNX25Q9H3E2 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
SNX25Q9H3E2 AC145676.1-201ENST00000514988 2004 ntBASIC25.42■■□□□ 1.66
SNX25Q9H3E2 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
SNX25Q9H3E2 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC25.41■■□□□ 1.66
SNX25Q9H3E2 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
SNX25Q9H3E2 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SNX25Q9H3E2 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
SNX25Q9H3E2 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC25.4■■□□□ 1.66
SNX25Q9H3E2 YBX1P4-201ENST00000392794 808 ntBASIC25.4■■□□□ 1.66
SNX25Q9H3E2 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SNX25Q9H3E2 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
SNX25Q9H3E2 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms