Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.9■■□□□ 1.1
TRIM2Q9C040 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.9■■□□□ 1.1
TRIM2Q9C040 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.9■■□□□ 1.1
TRIM2Q9C040 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
TRIM2Q9C040 AC097639.1-201ENST00000565519 1891 ntBASIC21.9■■□□□ 1.1
TRIM2Q9C040 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM2Q9C040 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TRIM2Q9C040 AC142381.3-201ENST00000568208 1670 ntBASIC21.89■■□□□ 1.1
TRIM2Q9C040 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
TRIM2Q9C040 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
TRIM2Q9C040 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.89■■□□□ 1.09
TRIM2Q9C040 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM2Q9C040 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM2Q9C040 RP9P-202ENST00000450133 1212 ntBASIC21.88■■□□□ 1.09
TRIM2Q9C040 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
TRIM2Q9C040 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM2Q9C040 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM2Q9C040 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM2Q9C040 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM2Q9C040 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
TRIM2Q9C040 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
TRIM2Q9C040 ABHD17AP5-201ENST00000580133 923 ntBASIC21.86■■□□□ 1.09
TRIM2Q9C040 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM2Q9C040 AC135731.1-201ENST00000569415 2548 ntBASIC21.86■■□□□ 1.09
TRIM2Q9C040 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM2Q9C040 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM2Q9C040 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM2Q9C040 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM2Q9C040 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM2Q9C040 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.85■■□□□ 1.09
TRIM2Q9C040 AC022211.4-201ENST00000625094 2161 ntBASIC21.85■■□□□ 1.09
TRIM2Q9C040 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM2Q9C040 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
TRIM2Q9C040 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM2Q9C040 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
TRIM2Q9C040 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM2Q9C040 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM2Q9C040 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM2Q9C040 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM2Q9C040 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM2Q9C040 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM2Q9C040 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.83■■□□□ 1.09
TRIM2Q9C040 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRIM2Q9C040 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.83■■□□□ 1.09
TRIM2Q9C040 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
TRIM2Q9C040 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRIM2Q9C040 AC093536.1-201ENST00000569153 554 ntBASIC21.83■■□□□ 1.09
TRIM2Q9C040 AC007029.1-201ENST00000604183 313 ntBASIC21.83■■□□□ 1.09
TRIM2Q9C040 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRIM2Q9C040 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
TRIM2Q9C040 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TRIM2Q9C040 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TRIM2Q9C040 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
TRIM2Q9C040 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TRIM2Q9C040 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM2Q9C040 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM2Q9C040 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM2Q9C040 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
TRIM2Q9C040 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.82■■□□□ 1.08
TRIM2Q9C040 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.81■■□□□ 1.08
TRIM2Q9C040 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM2Q9C040 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM2Q9C040 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM2Q9C040 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM2Q9C040 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.8■■□□□ 1.08
TRIM2Q9C040 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.8■■□□□ 1.08
TRIM2Q9C040 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.8■■□□□ 1.08
TRIM2Q9C040 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM2Q9C040 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM2Q9C040 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM2Q9C040 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.8■■□□□ 1.08
TRIM2Q9C040 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM2Q9C040 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM2Q9C040 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM2Q9C040 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.79■■□□□ 1.08
TRIM2Q9C040 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
TRIM2Q9C040 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.79■■□□□ 1.08
TRIM2Q9C040 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.79■■□□□ 1.08
TRIM2Q9C040 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM2Q9C040 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM2Q9C040 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM2Q9C040 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM2Q9C040 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM2Q9C040 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.78■■□□□ 1.08
TRIM2Q9C040 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.78■■□□□ 1.08
TRIM2Q9C040 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.78■■□□□ 1.08
TRIM2Q9C040 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM2Q9C040 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
TRIM2Q9C040 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM2Q9C040 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
TRIM2Q9C040 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
TRIM2Q9C040 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM2Q9C040 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM2Q9C040 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
TRIM2Q9C040 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM2Q9C040 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.76■■□□□ 1.07
TRIM2Q9C040 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM2Q9C040 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM2Q9C040 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.76■■□□□ 1.07
TRIM2Q9C040 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms