Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.88■□□□□ 0.77
SSBP3Q9BWW4 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SSBP3Q9BWW4 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.88■□□□□ 0.77
SSBP3Q9BWW4 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SSBP3Q9BWW4 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.88■□□□□ 0.77
SSBP3Q9BWW4 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SSBP3Q9BWW4 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SSBP3Q9BWW4 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SSBP3Q9BWW4 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SSBP3Q9BWW4 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.87■□□□□ 0.77
SSBP3Q9BWW4 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.87■□□□□ 0.77
SSBP3Q9BWW4 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SSBP3Q9BWW4 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
SSBP3Q9BWW4 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SSBP3Q9BWW4 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SSBP3Q9BWW4 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSBP3Q9BWW4 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
SSBP3Q9BWW4 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSBP3Q9BWW4 LONRF2P2-201ENST00000439212 571 ntBASIC19.86■□□□□ 0.77
SSBP3Q9BWW4 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSBP3Q9BWW4 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.86■□□□□ 0.77
SSBP3Q9BWW4 MIR4508-201ENST00000584178 70 ntBASIC19.86■□□□□ 0.77
SSBP3Q9BWW4 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SSBP3Q9BWW4 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSBP3Q9BWW4 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SSBP3Q9BWW4 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SSBP3Q9BWW4 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
SSBP3Q9BWW4 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SSBP3Q9BWW4 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SSBP3Q9BWW4 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SSBP3Q9BWW4 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SSBP3Q9BWW4 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SSBP3Q9BWW4 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SSBP3Q9BWW4 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SSBP3Q9BWW4 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.84■□□□□ 0.77
SSBP3Q9BWW4 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SSBP3Q9BWW4 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC19.83■□□□□ 0.77
SSBP3Q9BWW4 CREM-210ENST00000374721 2020 ntTSL 5 BASIC19.83■□□□□ 0.77
SSBP3Q9BWW4 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SSBP3Q9BWW4 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SSBP3Q9BWW4 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.83■□□□□ 0.77
SSBP3Q9BWW4 AC103834.1-201ENST00000520383 144 ntBASIC19.83■□□□□ 0.77
SSBP3Q9BWW4 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.83■□□□□ 0.77
SSBP3Q9BWW4 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.83■□□□□ 0.76
SSBP3Q9BWW4 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
SSBP3Q9BWW4 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC19.83■□□□□ 0.76
SSBP3Q9BWW4 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
SSBP3Q9BWW4 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SSBP3Q9BWW4 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SSBP3Q9BWW4 SHF-207ENST00000560540 2062 ntTSL 5 BASIC19.82■□□□□ 0.76
SSBP3Q9BWW4 SNAI3-AS1-204ENST00000567997 2048 ntBASIC19.81■□□□□ 0.76
SSBP3Q9BWW4 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SSBP3Q9BWW4 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SSBP3Q9BWW4 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
SSBP3Q9BWW4 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SSBP3Q9BWW4 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SSBP3Q9BWW4 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SSBP3Q9BWW4 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SSBP3Q9BWW4 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SSBP3Q9BWW4 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.8■□□□□ 0.76
SSBP3Q9BWW4 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SSBP3Q9BWW4 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SSBP3Q9BWW4 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SSBP3Q9BWW4 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.8■□□□□ 0.76
SSBP3Q9BWW4 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SSBP3Q9BWW4 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.79■□□□□ 0.76
SSBP3Q9BWW4 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSBP3Q9BWW4 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSBP3Q9BWW4 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSBP3Q9BWW4 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
SSBP3Q9BWW4 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
SSBP3Q9BWW4 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SSBP3Q9BWW4 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC19.79■□□□□ 0.76
SSBP3Q9BWW4 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SSBP3Q9BWW4 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SSBP3Q9BWW4 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SSBP3Q9BWW4 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.78■□□□□ 0.76
SSBP3Q9BWW4 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SSBP3Q9BWW4 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SSBP3Q9BWW4 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SSBP3Q9BWW4 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
SSBP3Q9BWW4 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SSBP3Q9BWW4 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.78■□□□□ 0.76
SSBP3Q9BWW4 AC022616.5-201ENST00000518796 181 ntBASIC19.78■□□□□ 0.76
SSBP3Q9BWW4 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.78■□□□□ 0.76
SSBP3Q9BWW4 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
SSBP3Q9BWW4 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.77■□□□□ 0.76
SSBP3Q9BWW4 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SSBP3Q9BWW4 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SSBP3Q9BWW4 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SSBP3Q9BWW4 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC19.77■□□□□ 0.76
SSBP3Q9BWW4 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.77■□□□□ 0.76
SSBP3Q9BWW4 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SSBP3Q9BWW4 AL451085.2-201ENST00000605085 799 ntBASIC19.77■□□□□ 0.76
SSBP3Q9BWW4 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SSBP3Q9BWW4 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSBP3Q9BWW4 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.76■□□□□ 0.75
SSBP3Q9BWW4 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC19.76■□□□□ 0.75
SSBP3Q9BWW4 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.76■□□□□ 0.75
SSBP3Q9BWW4 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms