Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SIMC1Q8NDZ2 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC22.46■■□□□ 1.19
SIMC1Q8NDZ2 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SIMC1Q8NDZ2 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SIMC1Q8NDZ2 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
SIMC1Q8NDZ2 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SIMC1Q8NDZ2 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC22.44■■□□□ 1.18
SIMC1Q8NDZ2 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC22.44■■□□□ 1.18
SIMC1Q8NDZ2 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC22.44■■□□□ 1.18
SIMC1Q8NDZ2 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC22.44■■□□□ 1.18
SIMC1Q8NDZ2 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
SIMC1Q8NDZ2 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
SIMC1Q8NDZ2 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SIMC1Q8NDZ2 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SIMC1Q8NDZ2 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
SIMC1Q8NDZ2 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SIMC1Q8NDZ2 AL592293.1-201ENST00000502889 1188 ntBASIC22.43■■□□□ 1.18
SIMC1Q8NDZ2 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SIMC1Q8NDZ2 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
SIMC1Q8NDZ2 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SIMC1Q8NDZ2 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.42■■□□□ 1.18
SIMC1Q8NDZ2 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC22.42■■□□□ 1.18
SIMC1Q8NDZ2 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
SIMC1Q8NDZ2 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
SIMC1Q8NDZ2 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SIMC1Q8NDZ2 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC22.42■■□□□ 1.18
SIMC1Q8NDZ2 AC020928.2-201ENST00000588717 2197 ntBASIC22.42■■□□□ 1.18
SIMC1Q8NDZ2 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC22.41■■□□□ 1.18
SIMC1Q8NDZ2 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
SIMC1Q8NDZ2 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
SIMC1Q8NDZ2 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
SIMC1Q8NDZ2 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SIMC1Q8NDZ2 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
SIMC1Q8NDZ2 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC22.41■■□□□ 1.18
SIMC1Q8NDZ2 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SIMC1Q8NDZ2 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SIMC1Q8NDZ2 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SIMC1Q8NDZ2 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
SIMC1Q8NDZ2 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SIMC1Q8NDZ2 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC22.4■■□□□ 1.18
SIMC1Q8NDZ2 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SIMC1Q8NDZ2 SPCS2P3-201ENST00000500401 656 ntBASIC22.4■■□□□ 1.18
SIMC1Q8NDZ2 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SIMC1Q8NDZ2 ABHD17AP5-201ENST00000580133 923 ntBASIC22.4■■□□□ 1.18
SIMC1Q8NDZ2 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
SIMC1Q8NDZ2 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.4■■□□□ 1.18
SIMC1Q8NDZ2 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SIMC1Q8NDZ2 HES4-204ENST00000484667 667 ntTSL 3 BASIC22.39■■□□□ 1.17
SIMC1Q8NDZ2 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SIMC1Q8NDZ2 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SIMC1Q8NDZ2 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SIMC1Q8NDZ2 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SIMC1Q8NDZ2 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC22.38■■□□□ 1.17
SIMC1Q8NDZ2 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SIMC1Q8NDZ2 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SIMC1Q8NDZ2 KRT18P60-201ENST00000312876 1297 ntBASIC22.37■■□□□ 1.17
SIMC1Q8NDZ2 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC22.37■■□□□ 1.17
SIMC1Q8NDZ2 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SIMC1Q8NDZ2 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SIMC1Q8NDZ2 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SIMC1Q8NDZ2 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SIMC1Q8NDZ2 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
SIMC1Q8NDZ2 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC22.36■■□□□ 1.17
SIMC1Q8NDZ2 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC22.36■■□□□ 1.17
SIMC1Q8NDZ2 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC22.35■■□□□ 1.17
SIMC1Q8NDZ2 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
SIMC1Q8NDZ2 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SIMC1Q8NDZ2 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SIMC1Q8NDZ2 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC22.34■■□□□ 1.17
SIMC1Q8NDZ2 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SIMC1Q8NDZ2 CEBPA-AS1-201ENST00000592982 2198 ntBASIC22.34■■□□□ 1.17
SIMC1Q8NDZ2 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
SIMC1Q8NDZ2 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SIMC1Q8NDZ2 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
SIMC1Q8NDZ2 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
SIMC1Q8NDZ2 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SIMC1Q8NDZ2 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SIMC1Q8NDZ2 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC22.33■■□□□ 1.17
SIMC1Q8NDZ2 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SIMC1Q8NDZ2 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC22.33■■□□□ 1.17
SIMC1Q8NDZ2 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SIMC1Q8NDZ2 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC22.33■■□□□ 1.17
SIMC1Q8NDZ2 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
SIMC1Q8NDZ2 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SIMC1Q8NDZ2 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SIMC1Q8NDZ2 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
SIMC1Q8NDZ2 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
SIMC1Q8NDZ2 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC22.32■■□□□ 1.16
SIMC1Q8NDZ2 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
SIMC1Q8NDZ2 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC22.32■■□□□ 1.16
SIMC1Q8NDZ2 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
SIMC1Q8NDZ2 NTF6A-201ENST00000591175 560 ntBASIC22.32■■□□□ 1.16
SIMC1Q8NDZ2 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.32■■□□□ 1.16
SIMC1Q8NDZ2 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SIMC1Q8NDZ2 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SIMC1Q8NDZ2 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SIMC1Q8NDZ2 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SIMC1Q8NDZ2 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
SIMC1Q8NDZ2 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC22.31■■□□□ 1.16
SIMC1Q8NDZ2 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms