Protein–RNA interactions for Protein: Q5VVM6

CCDC30, Coiled-coil domain-containing protein 30, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30Q5VVM6 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CCDC30Q5VVM6 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CCDC30Q5VVM6 AC103834.1-201ENST00000520383 144 ntBASIC30.68■■■□□ 2.5
CCDC30Q5VVM6 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
CCDC30Q5VVM6 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CCDC30Q5VVM6 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC30.67■■■□□ 2.5
CCDC30Q5VVM6 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC30.67■■■□□ 2.5
CCDC30Q5VVM6 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC30.67■■■□□ 2.5
CCDC30Q5VVM6 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC30.67■■■□□ 2.5
CCDC30Q5VVM6 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC30.66■■■□□ 2.5
CCDC30Q5VVM6 KRT8P33-201ENST00000508125 1423 ntBASIC30.66■■■□□ 2.5
CCDC30Q5VVM6 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC30.66■■■□□ 2.5
CCDC30Q5VVM6 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
CCDC30Q5VVM6 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC30.65■■■□□ 2.5
CCDC30Q5VVM6 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC30.65■■■□□ 2.5
CCDC30Q5VVM6 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC30.65■■■□□ 2.5
CCDC30Q5VVM6 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC30.65■■■□□ 2.5
CCDC30Q5VVM6 MIR4508-201ENST00000584178 70 ntBASIC30.65■■■□□ 2.5
CCDC30Q5VVM6 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC30.65■■■□□ 2.5
CCDC30Q5VVM6 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CCDC30Q5VVM6 AC010501.1-201ENST00000606270 1962 ntBASIC30.65■■■□□ 2.5
CCDC30Q5VVM6 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC30.64■■■□□ 2.5
CCDC30Q5VVM6 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CCDC30Q5VVM6 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC30.64■■■□□ 2.5
CCDC30Q5VVM6 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CCDC30Q5VVM6 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CCDC30Q5VVM6 AC096887.2-201ENST00000623443 1957 ntBASIC30.64■■■□□ 2.5
CCDC30Q5VVM6 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC30.64■■■□□ 2.5
CCDC30Q5VVM6 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC30.64■■■□□ 2.49
CCDC30Q5VVM6 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
CCDC30Q5VVM6 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC30.63■■■□□ 2.49
CCDC30Q5VVM6 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC30.63■■■□□ 2.49
CCDC30Q5VVM6 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
CCDC30Q5VVM6 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC30.62■■■□□ 2.49
CCDC30Q5VVM6 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC30.62■■■□□ 2.49
CCDC30Q5VVM6 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
CCDC30Q5VVM6 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
CCDC30Q5VVM6 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC30.61■■■□□ 2.49
CCDC30Q5VVM6 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC30.61■■■□□ 2.49
CCDC30Q5VVM6 YBX1P4-201ENST00000392794 808 ntBASIC30.61■■■□□ 2.49
CCDC30Q5VVM6 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC30.61■■■□□ 2.49
CCDC30Q5VVM6 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC30.6■■■□□ 2.49
CCDC30Q5VVM6 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC30.6■■■□□ 2.49
CCDC30Q5VVM6 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CCDC30Q5VVM6 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC30.59■■■□□ 2.49
CCDC30Q5VVM6 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
CCDC30Q5VVM6 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
CCDC30Q5VVM6 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CCDC30Q5VVM6 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC30.59■■■□□ 2.49
CCDC30Q5VVM6 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC30.58■■■□□ 2.49
CCDC30Q5VVM6 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
CCDC30Q5VVM6 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC30.58■■■□□ 2.49
CCDC30Q5VVM6 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC30.58■■■□□ 2.49
CCDC30Q5VVM6 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
CCDC30Q5VVM6 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC30.57■■■□□ 2.48
CCDC30Q5VVM6 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC30.57■■■□□ 2.48
CCDC30Q5VVM6 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC30.57■■■□□ 2.48
CCDC30Q5VVM6 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
CCDC30Q5VVM6 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
CCDC30Q5VVM6 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC30.56■■■□□ 2.48
CCDC30Q5VVM6 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC30.56■■■□□ 2.48
CCDC30Q5VVM6 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC30.56■■■□□ 2.48
CCDC30Q5VVM6 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
CCDC30Q5VVM6 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC30.56■■■□□ 2.48
CCDC30Q5VVM6 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CCDC30Q5VVM6 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC30.55■■■□□ 2.48
CCDC30Q5VVM6 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
CCDC30Q5VVM6 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CCDC30Q5VVM6 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
CCDC30Q5VVM6 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC30.54■■■□□ 2.48
CCDC30Q5VVM6 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
CCDC30Q5VVM6 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC30.54■■■□□ 2.48
CCDC30Q5VVM6 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC30.54■■■□□ 2.48
CCDC30Q5VVM6 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
CCDC30Q5VVM6 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
CCDC30Q5VVM6 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC30.54■■■□□ 2.48
CCDC30Q5VVM6 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC30.54■■■□□ 2.48
CCDC30Q5VVM6 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC30.54■■■□□ 2.48
CCDC30Q5VVM6 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
CCDC30Q5VVM6 AC091060.1-201ENST00000623524 1766 ntBASIC30.54■■■□□ 2.48
CCDC30Q5VVM6 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
CCDC30Q5VVM6 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC30.53■■■□□ 2.48
CCDC30Q5VVM6 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
CCDC30Q5VVM6 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC30.53■■■□□ 2.48
CCDC30Q5VVM6 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC30.53■■■□□ 2.48
CCDC30Q5VVM6 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC30.52■■■□□ 2.48
CCDC30Q5VVM6 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CCDC30Q5VVM6 AC022616.5-201ENST00000518796 181 ntBASIC30.52■■■□□ 2.48
CCDC30Q5VVM6 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
CCDC30Q5VVM6 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
CCDC30Q5VVM6 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
CCDC30Q5VVM6 AC103724.3-201ENST00000564481 992 ntBASIC30.51■■■□□ 2.47
CCDC30Q5VVM6 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
CCDC30Q5VVM6 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
CCDC30Q5VVM6 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CCDC30Q5VVM6 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
CCDC30Q5VVM6 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC30.5■■■□□ 2.47
CCDC30Q5VVM6 DUSP8P4-201ENST00000399538 1761 ntBASIC30.5■■■□□ 2.47
CCDC30Q5VVM6 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CCDC30Q5VVM6 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC30.5■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms