Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 AL161658.1-201ENST00000623641 1967 ntBASIC13.55□□□□□ -0.24
UBR4Q5T4S7 IRS3P-201ENST00000223076 1006 ntBASIC13.54□□□□□ -0.24
UBR4Q5T4S7 RASA4CP-201ENST00000424092 1398 ntBASIC13.54□□□□□ -0.24
UBR4Q5T4S7 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBR4Q5T4S7 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC13.54□□□□□ -0.24
UBR4Q5T4S7 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
UBR4Q5T4S7 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
UBR4Q5T4S7 KRT18P24-201ENST00000344739 1156 ntBASIC13.54□□□□□ -0.24
UBR4Q5T4S7 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
UBR4Q5T4S7 RPS2P7-201ENST00000447334 885 ntBASIC13.54□□□□□ -0.24
UBR4Q5T4S7 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
UBR4Q5T4S7 MAG-206ENST00000597035 542 ntTSL 4 BASIC13.54□□□□□ -0.24
UBR4Q5T4S7 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC13.54□□□□□ -0.24
UBR4Q5T4S7 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
UBR4Q5T4S7 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBR4Q5T4S7 AC091305.1-201ENST00000479476 895 ntBASIC13.53□□□□□ -0.24
UBR4Q5T4S7 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC13.53□□□□□ -0.24
UBR4Q5T4S7 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC13.53□□□□□ -0.24
UBR4Q5T4S7 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBR4Q5T4S7 SNX3-202ENST00000349379 890 ntTSL 2 BASIC13.53□□□□□ -0.24
UBR4Q5T4S7 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBR4Q5T4S7 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC13.53□□□□□ -0.24
UBR4Q5T4S7 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
UBR4Q5T4S7 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC13.53□□□□□ -0.24
UBR4Q5T4S7 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC13.52□□□□□ -0.24
UBR4Q5T4S7 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
UBR4Q5T4S7 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBR4Q5T4S7 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
UBR4Q5T4S7 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBR4Q5T4S7 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC13.52□□□□□ -0.25
UBR4Q5T4S7 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC13.52□□□□□ -0.25
UBR4Q5T4S7 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBR4Q5T4S7 GXYLT1P5-201ENST00000614548 1189 ntBASIC13.52□□□□□ -0.25
UBR4Q5T4S7 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
UBR4Q5T4S7 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
UBR4Q5T4S7 AC008687.6-201ENST00000596318 630 ntBASIC13.51□□□□□ -0.25
UBR4Q5T4S7 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC13.51□□□□□ -0.25
UBR4Q5T4S7 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC13.51□□□□□ -0.25
UBR4Q5T4S7 AL031602.1-201ENST00000633169 911 ntBASIC13.51□□□□□ -0.25
UBR4Q5T4S7 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC13.51□□□□□ -0.25
UBR4Q5T4S7 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBR4Q5T4S7 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBR4Q5T4S7 TK2-208ENST00000545043 1120 ntTSL 2 BASIC13.51□□□□□ -0.25
UBR4Q5T4S7 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBR4Q5T4S7 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
UBR4Q5T4S7 TSPY20P-201ENST00000450910 630 ntBASIC13.5□□□□□ -0.25
UBR4Q5T4S7 GRAMD4P4-201ENST00000613563 1115 ntBASIC13.5□□□□□ -0.25
UBR4Q5T4S7 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBR4Q5T4S7 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC13.5□□□□□ -0.25
UBR4Q5T4S7 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC13.5□□□□□ -0.25
UBR4Q5T4S7 RHOF-204ENST00000537265 699 ntTSL 2 BASIC13.5□□□□□ -0.25
UBR4Q5T4S7 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC13.5□□□□□ -0.25
UBR4Q5T4S7 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
UBR4Q5T4S7 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
UBR4Q5T4S7 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
UBR4Q5T4S7 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBR4Q5T4S7 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBR4Q5T4S7 EXOG-217ENST00000630638 197 ntTSL 5 BASIC13.5□□□□□ -0.25
UBR4Q5T4S7 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBR4Q5T4S7 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC13.49□□□□□ -0.25
UBR4Q5T4S7 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC13.49□□□□□ -0.25
UBR4Q5T4S7 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBR4Q5T4S7 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBR4Q5T4S7 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC13.49□□□□□ -0.25
UBR4Q5T4S7 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC13.49□□□□□ -0.25
UBR4Q5T4S7 MTDHP2-201ENST00000601468 714 ntBASIC13.49□□□□□ -0.25
UBR4Q5T4S7 RAP2CP1-201ENST00000605103 478 ntBASIC13.49□□□□□ -0.25
UBR4Q5T4S7 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBR4Q5T4S7 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBR4Q5T4S7 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
UBR4Q5T4S7 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBR4Q5T4S7 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBR4Q5T4S7 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
UBR4Q5T4S7 SP2-202ENST00000613139 908 ntTSL 5 BASIC13.48□□□□□ -0.25
UBR4Q5T4S7 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
UBR4Q5T4S7 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBR4Q5T4S7 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
UBR4Q5T4S7 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC13.48□□□□□ -0.25
UBR4Q5T4S7 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC13.48□□□□□ -0.25
UBR4Q5T4S7 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
UBR4Q5T4S7 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
UBR4Q5T4S7 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
UBR4Q5T4S7 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC13.47□□□□□ -0.25
UBR4Q5T4S7 JTB-203ENST00000368589 1216 ntTSL 2 BASIC13.47□□□□□ -0.25
UBR4Q5T4S7 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
UBR4Q5T4S7 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC13.47□□□□□ -0.25
UBR4Q5T4S7 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
UBR4Q5T4S7 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC13.46□□□□□ -0.25
UBR4Q5T4S7 AK3-203ENST00000447596 705 ntTSL 2 BASIC13.46□□□□□ -0.25
UBR4Q5T4S7 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
UBR4Q5T4S7 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
UBR4Q5T4S7 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
UBR4Q5T4S7 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
UBR4Q5T4S7 MIR1224-201ENST00000408193 85 ntBASIC13.46□□□□□ -0.26
UBR4Q5T4S7 SENP5-202ENST00000419026 973 ntTSL 3 BASIC13.46□□□□□ -0.26
UBR4Q5T4S7 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC13.46□□□□□ -0.26
UBR4Q5T4S7 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC13.46□□□□□ -0.26
UBR4Q5T4S7 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
UBR4Q5T4S7 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
UBR4Q5T4S7 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms