Protein–RNA interactions for Protein: Q53R12

TM4SF20, Transmembrane 4 L6 family member 20, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF20Q53R12 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TM4SF20Q53R12 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TM4SF20Q53R12 HES4-204ENST00000484667 667 ntTSL 3 BASIC18.42■□□□□ 0.54
TM4SF20Q53R12 ABHD17AP5-201ENST00000580133 923 ntBASIC18.42■□□□□ 0.54
TM4SF20Q53R12 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TM4SF20Q53R12 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TM4SF20Q53R12 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TM4SF20Q53R12 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TM4SF20Q53R12 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
TM4SF20Q53R12 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TM4SF20Q53R12 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TM4SF20Q53R12 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC18.41■□□□□ 0.54
TM4SF20Q53R12 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC18.41■□□□□ 0.54
TM4SF20Q53R12 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TM4SF20Q53R12 DUSP8P4-201ENST00000399538 1761 ntBASIC18.41■□□□□ 0.54
TM4SF20Q53R12 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC18.41■□□□□ 0.54
TM4SF20Q53R12 U85056.1-201ENST00000616429 682 ntBASIC18.41■□□□□ 0.54
TM4SF20Q53R12 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TM4SF20Q53R12 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TM4SF20Q53R12 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TM4SF20Q53R12 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TM4SF20Q53R12 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TM4SF20Q53R12 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TM4SF20Q53R12 AC010501.1-201ENST00000606270 1962 ntBASIC18.4■□□□□ 0.54
TM4SF20Q53R12 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TM4SF20Q53R12 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TM4SF20Q53R12 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
TM4SF20Q53R12 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TM4SF20Q53R12 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC18.4■□□□□ 0.54
TM4SF20Q53R12 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.39■□□□□ 0.54
TM4SF20Q53R12 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TM4SF20Q53R12 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TM4SF20Q53R12 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC18.39■□□□□ 0.53
TM4SF20Q53R12 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC18.39■□□□□ 0.53
TM4SF20Q53R12 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.39■□□□□ 0.53
TM4SF20Q53R12 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TM4SF20Q53R12 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TM4SF20Q53R12 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TM4SF20Q53R12 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC18.38■□□□□ 0.53
TM4SF20Q53R12 AL592293.1-201ENST00000502889 1188 ntBASIC18.38■□□□□ 0.53
TM4SF20Q53R12 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC18.38■□□□□ 0.53
TM4SF20Q53R12 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC18.38■□□□□ 0.53
TM4SF20Q53R12 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TM4SF20Q53R12 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC18.38■□□□□ 0.53
TM4SF20Q53R12 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TM4SF20Q53R12 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC18.38■□□□□ 0.53
TM4SF20Q53R12 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TM4SF20Q53R12 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TM4SF20Q53R12 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TM4SF20Q53R12 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TM4SF20Q53R12 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TM4SF20Q53R12 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TM4SF20Q53R12 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC18.37■□□□□ 0.53
TM4SF20Q53R12 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.36■□□□□ 0.53
TM4SF20Q53R12 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TM4SF20Q53R12 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TM4SF20Q53R12 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TM4SF20Q53R12 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
TM4SF20Q53R12 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TM4SF20Q53R12 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TM4SF20Q53R12 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TM4SF20Q53R12 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TM4SF20Q53R12 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TM4SF20Q53R12 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC18.35■□□□□ 0.53
TM4SF20Q53R12 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC18.35■□□□□ 0.53
TM4SF20Q53R12 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TM4SF20Q53R12 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TM4SF20Q53R12 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TM4SF20Q53R12 AC096887.2-201ENST00000623443 1957 ntBASIC18.35■□□□□ 0.53
TM4SF20Q53R12 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
TM4SF20Q53R12 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TM4SF20Q53R12 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TM4SF20Q53R12 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TM4SF20Q53R12 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC18.34■□□□□ 0.53
TM4SF20Q53R12 NTF6A-201ENST00000591175 560 ntBASIC18.34■□□□□ 0.53
TM4SF20Q53R12 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
TM4SF20Q53R12 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
TM4SF20Q53R12 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC18.34■□□□□ 0.53
TM4SF20Q53R12 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TM4SF20Q53R12 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
TM4SF20Q53R12 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TM4SF20Q53R12 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TM4SF20Q53R12 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC18.33■□□□□ 0.52
TM4SF20Q53R12 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TM4SF20Q53R12 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
TM4SF20Q53R12 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TM4SF20Q53R12 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC18.33■□□□□ 0.52
TM4SF20Q53R12 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TM4SF20Q53R12 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC18.33■□□□□ 0.52
TM4SF20Q53R12 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TM4SF20Q53R12 SNAI3-AS1-204ENST00000567997 2048 ntBASIC18.32■□□□□ 0.52
TM4SF20Q53R12 KRT18P60-201ENST00000312876 1297 ntBASIC18.32■□□□□ 0.52
TM4SF20Q53R12 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC18.32■□□□□ 0.52
TM4SF20Q53R12 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TM4SF20Q53R12 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
TM4SF20Q53R12 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TM4SF20Q53R12 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
TM4SF20Q53R12 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TM4SF20Q53R12 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
TM4SF20Q53R12 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms