Protein–RNA interactions for Protein: P35713

SOX18, Transcription factor SOX-18, humanhuman

Predictions only

Length 384 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX18P35713 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC22.39■■□□□ 1.18
SOX18P35713 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC22.39■■□□□ 1.17
SOX18P35713 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC22.39■■□□□ 1.17
SOX18P35713 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
SOX18P35713 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
SOX18P35713 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SOX18P35713 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SOX18P35713 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC22.39■■□□□ 1.17
SOX18P35713 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SOX18P35713 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC22.38■■□□□ 1.17
SOX18P35713 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SOX18P35713 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SOX18P35713 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC22.38■■□□□ 1.17
SOX18P35713 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SOX18P35713 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
SOX18P35713 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SOX18P35713 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SOX18P35713 KRT18P60-201ENST00000312876 1297 ntBASIC22.37■■□□□ 1.17
SOX18P35713 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
SOX18P35713 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
SOX18P35713 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
SOX18P35713 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
SOX18P35713 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
SOX18P35713 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SOX18P35713 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
SOX18P35713 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
SOX18P35713 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
SOX18P35713 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SOX18P35713 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SOX18P35713 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.35■■□□□ 1.17
SOX18P35713 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SOX18P35713 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC22.35■■□□□ 1.17
SOX18P35713 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC22.35■■□□□ 1.17
SOX18P35713 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC22.35■■□□□ 1.17
SOX18P35713 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
SOX18P35713 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SOX18P35713 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
SOX18P35713 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SOX18P35713 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SOX18P35713 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SOX18P35713 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC22.34■■□□□ 1.17
SOX18P35713 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SOX18P35713 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
SOX18P35713 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SOX18P35713 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
SOX18P35713 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
SOX18P35713 SNAI3-AS1-204ENST00000567997 2048 ntBASIC22.33■■□□□ 1.17
SOX18P35713 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SOX18P35713 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
SOX18P35713 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22.33■■□□□ 1.17
SOX18P35713 CEBPA-AS1-201ENST00000592982 2198 ntBASIC22.33■■□□□ 1.16
SOX18P35713 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
SOX18P35713 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
SOX18P35713 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
SOX18P35713 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SOX18P35713 NTF6A-201ENST00000591175 560 ntBASIC22.32■■□□□ 1.16
SOX18P35713 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC22.32■■□□□ 1.16
SOX18P35713 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SOX18P35713 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SOX18P35713 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SOX18P35713 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC22.31■■□□□ 1.16
SOX18P35713 AC129492.7-201ENST00000622992 756 ntBASIC22.31■■□□□ 1.16
SOX18P35713 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
SOX18P35713 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC22.3■■□□□ 1.16
SOX18P35713 AC097639.1-201ENST00000565519 1891 ntBASIC22.3■■□□□ 1.16
SOX18P35713 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SOX18P35713 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC22.3■■□□□ 1.16
SOX18P35713 DUX4L9-201ENST00000449051 1259 ntBASIC22.3■■□□□ 1.16
SOX18P35713 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SOX18P35713 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC22.29■■□□□ 1.16
SOX18P35713 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SOX18P35713 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
SOX18P35713 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC22.29■■□□□ 1.16
SOX18P35713 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SOX18P35713 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SOX18P35713 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SOX18P35713 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SOX18P35713 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
SOX18P35713 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SOX18P35713 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC22.27■■□□□ 1.16
SOX18P35713 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SOX18P35713 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC22.27■■□□□ 1.16
SOX18P35713 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC22.27■■□□□ 1.16
SOX18P35713 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
SOX18P35713 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SOX18P35713 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.26■■□□□ 1.15
SOX18P35713 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
SOX18P35713 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
SOX18P35713 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.26■■□□□ 1.15
SOX18P35713 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SOX18P35713 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SOX18P35713 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC22.26■■□□□ 1.15
SOX18P35713 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SOX18P35713 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC22.25■■□□□ 1.15
SOX18P35713 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SOX18P35713 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC22.25■■□□□ 1.15
SOX18P35713 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SOX18P35713 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SOX18P35713 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
SOX18P35713 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms