Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.77■□□□□ 0.76
CTSDP07339 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTSDP07339 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC19.77■□□□□ 0.76
CTSDP07339 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CTSDP07339 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.77■□□□□ 0.75
CTSDP07339 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
CTSDP07339 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTSDP07339 SLC6A10P-202ENST00000431994 2058 ntBASIC19.76■□□□□ 0.75
CTSDP07339 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.76■□□□□ 0.75
CTSDP07339 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CTSDP07339 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CTSDP07339 BOD1-206ENST00000480951 814 ntTSL 2 BASIC19.76■□□□□ 0.75
CTSDP07339 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.76■□□□□ 0.75
CTSDP07339 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.76■□□□□ 0.75
CTSDP07339 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTSDP07339 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTSDP07339 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CTSDP07339 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.75■□□□□ 0.75
CTSDP07339 AL359504.2-201ENST00000605506 1601 ntBASIC19.75■□□□□ 0.75
CTSDP07339 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTSDP07339 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTSDP07339 AC068473.5-201ENST00000616428 2072 ntBASIC19.74■□□□□ 0.75
CTSDP07339 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.74■□□□□ 0.75
CTSDP07339 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTSDP07339 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTSDP07339 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTSDP07339 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTSDP07339 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTSDP07339 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTSDP07339 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTSDP07339 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CTSDP07339 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTSDP07339 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CTSDP07339 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CTSDP07339 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CTSDP07339 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTSDP07339 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTSDP07339 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CTSDP07339 MIR219A2-201ENST00000608502 1504 ntBASIC19.72■□□□□ 0.75
CTSDP07339 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CTSDP07339 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTSDP07339 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTSDP07339 DUX4L29-201ENST00000425409 679 ntBASIC19.72■□□□□ 0.75
CTSDP07339 AC008813.1-201ENST00000536597 885 ntBASIC19.72■□□□□ 0.75
CTSDP07339 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTSDP07339 CHML-204ENST00000638121 920 ntTSL 2 BASIC19.72■□□□□ 0.75
CTSDP07339 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.72■□□□□ 0.75
CTSDP07339 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CTSDP07339 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTSDP07339 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CTSDP07339 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CTSDP07339 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTSDP07339 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTSDP07339 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.71■□□□□ 0.75
CTSDP07339 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTSDP07339 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTSDP07339 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTSDP07339 AL359258.2-201ENST00000564063 1566 ntBASIC19.7■□□□□ 0.74
CTSDP07339 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CTSDP07339 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTSDP07339 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC19.7■□□□□ 0.74
CTSDP07339 AC148477.6-201ENST00000623746 465 ntBASIC19.7■□□□□ 0.74
CTSDP07339 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTSDP07339 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CTSDP07339 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTSDP07339 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTSDP07339 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTSDP07339 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC19.69■□□□□ 0.74
CTSDP07339 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.69■□□□□ 0.74
CTSDP07339 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.69■□□□□ 0.74
CTSDP07339 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTSDP07339 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTSDP07339 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.69■□□□□ 0.74
CTSDP07339 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTSDP07339 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CTSDP07339 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
CTSDP07339 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CTSDP07339 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTSDP07339 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTSDP07339 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTSDP07339 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.68■□□□□ 0.74
CTSDP07339 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CTSDP07339 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTSDP07339 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTSDP07339 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CTSDP07339 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTSDP07339 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.67■□□□□ 0.74
CTSDP07339 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CTSDP07339 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTSDP07339 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.67■□□□□ 0.74
CTSDP07339 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTSDP07339 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.67■□□□□ 0.74
CTSDP07339 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTSDP07339 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.67■□□□□ 0.74
CTSDP07339 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTSDP07339 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTSDP07339 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CTSDP07339 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CTSDP07339 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTSDP07339 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms