Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
APAF1O14727 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC31.59■■■□□ 2.65
APAF1O14727 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC31.59■■■□□ 2.65
APAF1O14727 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
APAF1O14727 AC018755.3-202ENST00000596210 929 ntBASIC31.58■■■□□ 2.65
APAF1O14727 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
APAF1O14727 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
APAF1O14727 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC31.58■■■□□ 2.65
APAF1O14727 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
APAF1O14727 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC31.57■■■□□ 2.64
APAF1O14727 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
APAF1O14727 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
APAF1O14727 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
APAF1O14727 AC004987.1-201ENST00000428627 508 ntBASIC31.56■■■□□ 2.64
APAF1O14727 DUX4L18-201ENST00000553347 1267 ntBASIC31.56■■■□□ 2.64
APAF1O14727 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC31.56■■■□□ 2.64
APAF1O14727 AC097639.1-201ENST00000565519 1891 ntBASIC31.56■■■□□ 2.64
APAF1O14727 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
APAF1O14727 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
APAF1O14727 MIR6765-201ENST00000614092 87 ntBASIC31.55■■■□□ 2.64
APAF1O14727 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC31.55■■■□□ 2.64
APAF1O14727 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC31.55■■■□□ 2.64
APAF1O14727 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC31.55■■■□□ 2.64
APAF1O14727 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
APAF1O14727 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
APAF1O14727 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
APAF1O14727 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC31.54■■■□□ 2.64
APAF1O14727 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
APAF1O14727 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC31.53■■■□□ 2.64
APAF1O14727 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
APAF1O14727 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
APAF1O14727 AC020928.2-201ENST00000588717 2197 ntBASIC31.53■■■□□ 2.64
APAF1O14727 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC31.53■■■□□ 2.64
APAF1O14727 ATP5G2P3-201ENST00000429083 425 ntBASIC31.53■■■□□ 2.64
APAF1O14727 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC31.53■■■□□ 2.64
APAF1O14727 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC31.53■■■□□ 2.64
APAF1O14727 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
APAF1O14727 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
APAF1O14727 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
APAF1O14727 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC31.52■■■□□ 2.64
APAF1O14727 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC31.52■■■□□ 2.64
APAF1O14727 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC31.52■■■□□ 2.64
APAF1O14727 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC31.52■■■□□ 2.64
APAF1O14727 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
APAF1O14727 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
APAF1O14727 IDNK-203ENST00000405990 629 ntTSL 2 BASIC31.51■■■□□ 2.63
APAF1O14727 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC31.5■■■□□ 2.63
APAF1O14727 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
APAF1O14727 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC31.5■■■□□ 2.63
APAF1O14727 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC31.5■■■□□ 2.63
APAF1O14727 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC31.5■■■□□ 2.63
APAF1O14727 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC31.5■■■□□ 2.63
APAF1O14727 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC31.5■■■□□ 2.63
APAF1O14727 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC31.5■■■□□ 2.63
APAF1O14727 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC31.5■■■□□ 2.63
APAF1O14727 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC31.5■■■□□ 2.63
APAF1O14727 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC31.5■■■□□ 2.63
APAF1O14727 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
APAF1O14727 RPS2P7-201ENST00000447334 885 ntBASIC31.48■■■□□ 2.63
APAF1O14727 CEBPA-AS1-201ENST00000592982 2198 ntBASIC31.47■■■□□ 2.63
APAF1O14727 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC31.47■■■□□ 2.63
APAF1O14727 AC012354.3-201ENST00000623734 483 ntBASIC31.47■■■□□ 2.63
APAF1O14727 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
APAF1O14727 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
APAF1O14727 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
APAF1O14727 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC31.47■■■□□ 2.63
APAF1O14727 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC31.47■■■□□ 2.63
APAF1O14727 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
APAF1O14727 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
APAF1O14727 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC31.46■■■□□ 2.63
APAF1O14727 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC31.46■■■□□ 2.63
APAF1O14727 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
APAF1O14727 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
APAF1O14727 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC31.45■■■□□ 2.63
APAF1O14727 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC31.45■■■□□ 2.63
APAF1O14727 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
APAF1O14727 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC31.45■■■□□ 2.63
APAF1O14727 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
APAF1O14727 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
APAF1O14727 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC31.44■■■□□ 2.62
APAF1O14727 TSPY13P-201ENST00000338964 914 ntBASIC31.44■■■□□ 2.62
APAF1O14727 AL033527.3-201ENST00000566366 1196 ntBASIC31.44■■■□□ 2.62
APAF1O14727 AC087393.1-201ENST00000582896 145 ntBASIC31.44■■■□□ 2.62
APAF1O14727 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
APAF1O14727 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
APAF1O14727 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
APAF1O14727 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC31.43■■■□□ 2.62
APAF1O14727 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
APAF1O14727 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC31.42■■■□□ 2.62
APAF1O14727 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
APAF1O14727 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
APAF1O14727 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
APAF1O14727 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
APAF1O14727 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC31.41■■■□□ 2.62
APAF1O14727 KRT18P10-201ENST00000388836 1287 ntBASIC31.41■■■□□ 2.62
APAF1O14727 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC31.41■■■□□ 2.62
APAF1O14727 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
APAF1O14727 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
APAF1O14727 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
APAF1O14727 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms