Protein–RNA interactions for Protein: A0A0J9YX44

TRBV5-5, T-cell receptor beta variable 5-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5A0A0J9YX44 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRBV5-5A0A0J9YX44 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
TRBV5-5A0A0J9YX44 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
TRBV5-5A0A0J9YX44 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.77■□□□□ 0.92
TRBV5-5A0A0J9YX44 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
TRBV5-5A0A0J9YX44 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRBV5-5A0A0J9YX44 LINC00543-201ENST00000567234 1845 ntBASIC20.77■□□□□ 0.92
TRBV5-5A0A0J9YX44 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRBV5-5A0A0J9YX44 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
TRBV5-5A0A0J9YX44 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TRBV5-5A0A0J9YX44 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRBV5-5A0A0J9YX44 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRBV5-5A0A0J9YX44 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRBV5-5A0A0J9YX44 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
TRBV5-5A0A0J9YX44 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.76■□□□□ 0.91
TRBV5-5A0A0J9YX44 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRBV5-5A0A0J9YX44 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
TRBV5-5A0A0J9YX44 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
TRBV5-5A0A0J9YX44 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
TRBV5-5A0A0J9YX44 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRBV5-5A0A0J9YX44 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.74■□□□□ 0.91
TRBV5-5A0A0J9YX44 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRBV5-5A0A0J9YX44 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRBV5-5A0A0J9YX44 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRBV5-5A0A0J9YX44 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRBV5-5A0A0J9YX44 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.74■□□□□ 0.91
TRBV5-5A0A0J9YX44 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.74■□□□□ 0.91
TRBV5-5A0A0J9YX44 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRBV5-5A0A0J9YX44 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRBV5-5A0A0J9YX44 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.74■□□□□ 0.91
TRBV5-5A0A0J9YX44 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRBV5-5A0A0J9YX44 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRBV5-5A0A0J9YX44 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRBV5-5A0A0J9YX44 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRBV5-5A0A0J9YX44 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRBV5-5A0A0J9YX44 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRBV5-5A0A0J9YX44 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRBV5-5A0A0J9YX44 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRBV5-5A0A0J9YX44 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRBV5-5A0A0J9YX44 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRBV5-5A0A0J9YX44 AC141586.4-201ENST00000624558 1573 ntBASIC20.72■□□□□ 0.91
TRBV5-5A0A0J9YX44 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRBV5-5A0A0J9YX44 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRBV5-5A0A0J9YX44 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
TRBV5-5A0A0J9YX44 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRBV5-5A0A0J9YX44 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRBV5-5A0A0J9YX44 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRBV5-5A0A0J9YX44 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.72■□□□□ 0.91
TRBV5-5A0A0J9YX44 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRBV5-5A0A0J9YX44 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRBV5-5A0A0J9YX44 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRBV5-5A0A0J9YX44 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRBV5-5A0A0J9YX44 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRBV5-5A0A0J9YX44 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
TRBV5-5A0A0J9YX44 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.71■□□□□ 0.91
TRBV5-5A0A0J9YX44 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.71■□□□□ 0.91
TRBV5-5A0A0J9YX44 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
TRBV5-5A0A0J9YX44 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRBV5-5A0A0J9YX44 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRBV5-5A0A0J9YX44 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRBV5-5A0A0J9YX44 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRBV5-5A0A0J9YX44 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.7■□□□□ 0.9
TRBV5-5A0A0J9YX44 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRBV5-5A0A0J9YX44 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRBV5-5A0A0J9YX44 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.7■□□□□ 0.9
TRBV5-5A0A0J9YX44 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRBV5-5A0A0J9YX44 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRBV5-5A0A0J9YX44 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRBV5-5A0A0J9YX44 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.69■□□□□ 0.9
TRBV5-5A0A0J9YX44 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRBV5-5A0A0J9YX44 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRBV5-5A0A0J9YX44 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
TRBV5-5A0A0J9YX44 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRBV5-5A0A0J9YX44 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRBV5-5A0A0J9YX44 AC126177.7-201ENST00000547904 679 ntBASIC20.69■□□□□ 0.9
TRBV5-5A0A0J9YX44 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
TRBV5-5A0A0J9YX44 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.69■□□□□ 0.9
TRBV5-5A0A0J9YX44 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRBV5-5A0A0J9YX44 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRBV5-5A0A0J9YX44 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRBV5-5A0A0J9YX44 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRBV5-5A0A0J9YX44 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.68■□□□□ 0.9
TRBV5-5A0A0J9YX44 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRBV5-5A0A0J9YX44 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.68■□□□□ 0.9
TRBV5-5A0A0J9YX44 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
TRBV5-5A0A0J9YX44 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
TRBV5-5A0A0J9YX44 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRBV5-5A0A0J9YX44 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRBV5-5A0A0J9YX44 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
TRBV5-5A0A0J9YX44 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRBV5-5A0A0J9YX44 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRBV5-5A0A0J9YX44 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.68■□□□□ 0.9
TRBV5-5A0A0J9YX44 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
TRBV5-5A0A0J9YX44 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TRBV5-5A0A0J9YX44 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRBV5-5A0A0J9YX44 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRBV5-5A0A0J9YX44 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRBV5-5A0A0J9YX44 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRBV5-5A0A0J9YX44 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRBV5-5A0A0J9YX44 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms