Protein–RNA interactions for Protein: Q9H2H0

CXXC4, CXXC-type zinc finger protein 4, humanhuman

Predictions only

Length 198 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4Q9H2H0 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CXXC4Q9H2H0 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.03■□□□□ 0.96
CXXC4Q9H2H0 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CXXC4Q9H2H0 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.03■□□□□ 0.96
CXXC4Q9H2H0 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CXXC4Q9H2H0 MIR3960-201ENST00000583311 91 ntBASIC21.03■□□□□ 0.96
CXXC4Q9H2H0 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CXXC4Q9H2H0 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CXXC4Q9H2H0 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.02■□□□□ 0.96
CXXC4Q9H2H0 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.02■□□□□ 0.96
CXXC4Q9H2H0 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.02■□□□□ 0.96
CXXC4Q9H2H0 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.01■□□□□ 0.95
CXXC4Q9H2H0 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
CXXC4Q9H2H0 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.01■□□□□ 0.95
CXXC4Q9H2H0 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CXXC4Q9H2H0 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.01■□□□□ 0.95
CXXC4Q9H2H0 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
CXXC4Q9H2H0 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21■□□□□ 0.95
CXXC4Q9H2H0 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CXXC4Q9H2H0 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21■□□□□ 0.95
CXXC4Q9H2H0 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21■□□□□ 0.95
CXXC4Q9H2H0 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CXXC4Q9H2H0 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21■□□□□ 0.95
CXXC4Q9H2H0 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21■□□□□ 0.95
CXXC4Q9H2H0 AP004609.3-201ENST00000610705 1884 ntBASIC21■□□□□ 0.95
CXXC4Q9H2H0 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21■□□□□ 0.95
CXXC4Q9H2H0 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CXXC4Q9H2H0 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CXXC4Q9H2H0 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CXXC4Q9H2H0 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CXXC4Q9H2H0 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CXXC4Q9H2H0 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CXXC4Q9H2H0 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CXXC4Q9H2H0 Z92544.1-202ENST00000571933 1220 ntBASIC20.98■□□□□ 0.95
CXXC4Q9H2H0 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CXXC4Q9H2H0 AC142472.1-201ENST00000612013 1741 ntBASIC20.98■□□□□ 0.95
CXXC4Q9H2H0 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CXXC4Q9H2H0 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CXXC4Q9H2H0 AC239859.2-201ENST00000444165 318 ntBASIC20.97■□□□□ 0.95
CXXC4Q9H2H0 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.97■□□□□ 0.95
CXXC4Q9H2H0 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.97■□□□□ 0.95
CXXC4Q9H2H0 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CXXC4Q9H2H0 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CXXC4Q9H2H0 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
CXXC4Q9H2H0 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CXXC4Q9H2H0 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.96■□□□□ 0.95
CXXC4Q9H2H0 AC019171.1-201ENST00000601251 1056 ntBASIC20.96■□□□□ 0.95
CXXC4Q9H2H0 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CXXC4Q9H2H0 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CXXC4Q9H2H0 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
CXXC4Q9H2H0 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CXXC4Q9H2H0 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.95■□□□□ 0.94
CXXC4Q9H2H0 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CXXC4Q9H2H0 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CXXC4Q9H2H0 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CXXC4Q9H2H0 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CXXC4Q9H2H0 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CXXC4Q9H2H0 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CXXC4Q9H2H0 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.94■□□□□ 0.94
CXXC4Q9H2H0 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CXXC4Q9H2H0 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.93■□□□□ 0.94
CXXC4Q9H2H0 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CXXC4Q9H2H0 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.93■□□□□ 0.94
CXXC4Q9H2H0 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.93■□□□□ 0.94
CXXC4Q9H2H0 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CXXC4Q9H2H0 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CXXC4Q9H2H0 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CXXC4Q9H2H0 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.93■□□□□ 0.94
CXXC4Q9H2H0 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CXXC4Q9H2H0 MIR638-201ENST00000385237 100 ntBASIC20.92■□□□□ 0.94
CXXC4Q9H2H0 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.92■□□□□ 0.94
CXXC4Q9H2H0 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.92■□□□□ 0.94
CXXC4Q9H2H0 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.92■□□□□ 0.94
CXXC4Q9H2H0 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CXXC4Q9H2H0 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CXXC4Q9H2H0 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.92■□□□□ 0.94
CXXC4Q9H2H0 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
CXXC4Q9H2H0 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.91■□□□□ 0.94
CXXC4Q9H2H0 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CXXC4Q9H2H0 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CXXC4Q9H2H0 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.91■□□□□ 0.94
CXXC4Q9H2H0 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CXXC4Q9H2H0 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.91■□□□□ 0.94
CXXC4Q9H2H0 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.91■□□□□ 0.94
CXXC4Q9H2H0 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CXXC4Q9H2H0 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CXXC4Q9H2H0 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CXXC4Q9H2H0 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.9■□□□□ 0.94
CXXC4Q9H2H0 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.9■□□□□ 0.94
CXXC4Q9H2H0 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.9■□□□□ 0.94
CXXC4Q9H2H0 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.9■□□□□ 0.94
CXXC4Q9H2H0 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CXXC4Q9H2H0 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CXXC4Q9H2H0 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CXXC4Q9H2H0 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
CXXC4Q9H2H0 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.89■□□□□ 0.93
CXXC4Q9H2H0 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CXXC4Q9H2H0 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CXXC4Q9H2H0 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CXXC4Q9H2H0 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms