Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CHCHD1Q96BP2 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHCHD1Q96BP2 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHCHD1Q96BP2 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHCHD1Q96BP2 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CHCHD1Q96BP2 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHCHD1Q96BP2 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHCHD1Q96BP2 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHCHD1Q96BP2 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC17.49■□□□□ 0.39
CHCHD1Q96BP2 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC17.49■□□□□ 0.39
CHCHD1Q96BP2 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHCHD1Q96BP2 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHCHD1Q96BP2 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.49■□□□□ 0.39
CHCHD1Q96BP2 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHCHD1Q96BP2 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHCHD1Q96BP2 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
CHCHD1Q96BP2 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHCHD1Q96BP2 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CHCHD1Q96BP2 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHCHD1Q96BP2 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHCHD1Q96BP2 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHCHD1Q96BP2 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CHCHD1Q96BP2 AL117328.2-201ENST00000624617 1940 ntBASIC17.48■□□□□ 0.39
CHCHD1Q96BP2 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHCHD1Q96BP2 AC141586.4-201ENST00000624558 1573 ntBASIC17.48■□□□□ 0.39
CHCHD1Q96BP2 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHCHD1Q96BP2 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHCHD1Q96BP2 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHCHD1Q96BP2 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CHCHD1Q96BP2 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHCHD1Q96BP2 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHCHD1Q96BP2 AL133380.1-201ENST00000506013 324 ntBASIC17.47■□□□□ 0.39
CHCHD1Q96BP2 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHCHD1Q96BP2 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHCHD1Q96BP2 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHCHD1Q96BP2 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHCHD1Q96BP2 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHCHD1Q96BP2 ME2-208ENST00000638937 2471 ntTSL 5 BASIC17.46■□□□□ 0.39
CHCHD1Q96BP2 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHCHD1Q96BP2 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
CHCHD1Q96BP2 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHCHD1Q96BP2 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CHCHD1Q96BP2 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CHCHD1Q96BP2 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHCHD1Q96BP2 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.45■□□□□ 0.38
CHCHD1Q96BP2 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHCHD1Q96BP2 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHCHD1Q96BP2 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CHCHD1Q96BP2 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHCHD1Q96BP2 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHCHD1Q96BP2 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHCHD1Q96BP2 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHCHD1Q96BP2 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CHCHD1Q96BP2 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
CHCHD1Q96BP2 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
CHCHD1Q96BP2 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CHCHD1Q96BP2 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC17.44■□□□□ 0.38
CHCHD1Q96BP2 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHCHD1Q96BP2 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHCHD1Q96BP2 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.44■□□□□ 0.38
CHCHD1Q96BP2 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHCHD1Q96BP2 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CHCHD1Q96BP2 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CHCHD1Q96BP2 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHCHD1Q96BP2 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHCHD1Q96BP2 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHCHD1Q96BP2 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHCHD1Q96BP2 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHCHD1Q96BP2 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHCHD1Q96BP2 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHCHD1Q96BP2 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHCHD1Q96BP2 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHCHD1Q96BP2 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHCHD1Q96BP2 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHCHD1Q96BP2 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CHCHD1Q96BP2 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHCHD1Q96BP2 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC17.43■□□□□ 0.38
CHCHD1Q96BP2 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHCHD1Q96BP2 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC17.43■□□□□ 0.38
CHCHD1Q96BP2 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHCHD1Q96BP2 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHCHD1Q96BP2 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHCHD1Q96BP2 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC17.43■□□□□ 0.38
CHCHD1Q96BP2 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHCHD1Q96BP2 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHCHD1Q96BP2 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHCHD1Q96BP2 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHCHD1Q96BP2 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC17.43■□□□□ 0.38
CHCHD1Q96BP2 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHCHD1Q96BP2 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CHCHD1Q96BP2 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHCHD1Q96BP2 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHCHD1Q96BP2 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC17.42■□□□□ 0.38
CHCHD1Q96BP2 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC17.42■□□□□ 0.38
CHCHD1Q96BP2 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHCHD1Q96BP2 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CHCHD1Q96BP2 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CHCHD1Q96BP2 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHCHD1Q96BP2 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.42■□□□□ 0.38
CHCHD1Q96BP2 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 8.5 ms