Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LYSMD2Q8IV50 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LYSMD2Q8IV50 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
LYSMD2Q8IV50 RARRES2P7-201ENST00000567349 469 ntBASIC21.09■□□□□ 0.97
LYSMD2Q8IV50 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LYSMD2Q8IV50 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.09■□□□□ 0.97
LYSMD2Q8IV50 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
LYSMD2Q8IV50 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.09■□□□□ 0.97
LYSMD2Q8IV50 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
LYSMD2Q8IV50 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LYSMD2Q8IV50 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LYSMD2Q8IV50 AL391121.1-201ENST00000607967 1349 ntBASIC21.08■□□□□ 0.97
LYSMD2Q8IV50 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LYSMD2Q8IV50 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LYSMD2Q8IV50 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LYSMD2Q8IV50 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
LYSMD2Q8IV50 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.08■□□□□ 0.97
LYSMD2Q8IV50 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.08■□□□□ 0.97
LYSMD2Q8IV50 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.96
LYSMD2Q8IV50 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LYSMD2Q8IV50 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
LYSMD2Q8IV50 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
LYSMD2Q8IV50 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LYSMD2Q8IV50 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
LYSMD2Q8IV50 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LYSMD2Q8IV50 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
LYSMD2Q8IV50 AC135983.2-203ENST00000454486 1613 ntBASIC21.07■□□□□ 0.96
LYSMD2Q8IV50 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.07■□□□□ 0.96
LYSMD2Q8IV50 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LYSMD2Q8IV50 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LYSMD2Q8IV50 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LYSMD2Q8IV50 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LYSMD2Q8IV50 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.06■□□□□ 0.96
LYSMD2Q8IV50 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
LYSMD2Q8IV50 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
LYSMD2Q8IV50 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
LYSMD2Q8IV50 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LYSMD2Q8IV50 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LYSMD2Q8IV50 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LYSMD2Q8IV50 AL024507.2-201ENST00000606070 2574 ntBASIC21.06■□□□□ 0.96
LYSMD2Q8IV50 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.06■□□□□ 0.96
LYSMD2Q8IV50 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LYSMD2Q8IV50 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LYSMD2Q8IV50 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LYSMD2Q8IV50 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LYSMD2Q8IV50 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LYSMD2Q8IV50 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
LYSMD2Q8IV50 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LYSMD2Q8IV50 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
LYSMD2Q8IV50 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
LYSMD2Q8IV50 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC21.04■□□□□ 0.96
LYSMD2Q8IV50 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
LYSMD2Q8IV50 AL117328.2-201ENST00000624617 1940 ntBASIC21.04■□□□□ 0.96
LYSMD2Q8IV50 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
LYSMD2Q8IV50 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
LYSMD2Q8IV50 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LYSMD2Q8IV50 CAHM-201ENST00000604200 896 ntBASIC21.03■□□□□ 0.96
LYSMD2Q8IV50 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LYSMD2Q8IV50 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.03■□□□□ 0.96
LYSMD2Q8IV50 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.02■□□□□ 0.96
LYSMD2Q8IV50 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.02■□□□□ 0.96
LYSMD2Q8IV50 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LYSMD2Q8IV50 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
LYSMD2Q8IV50 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
LYSMD2Q8IV50 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
LYSMD2Q8IV50 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC21.02■□□□□ 0.95
LYSMD2Q8IV50 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
LYSMD2Q8IV50 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.01■□□□□ 0.95
LYSMD2Q8IV50 C9orf163-202ENST00000624034 2573 ntBASIC21.01■□□□□ 0.95
LYSMD2Q8IV50 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21■□□□□ 0.95
LYSMD2Q8IV50 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LYSMD2Q8IV50 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LYSMD2Q8IV50 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21■□□□□ 0.95
LYSMD2Q8IV50 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LYSMD2Q8IV50 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LYSMD2Q8IV50 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21■□□□□ 0.95
LYSMD2Q8IV50 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.99■□□□□ 0.95
LYSMD2Q8IV50 WHAMMP2-203ENST00000563942 1603 ntBASIC20.99■□□□□ 0.95
LYSMD2Q8IV50 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
LYSMD2Q8IV50 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LYSMD2Q8IV50 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
LYSMD2Q8IV50 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LYSMD2Q8IV50 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC20.98■□□□□ 0.95
LYSMD2Q8IV50 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LYSMD2Q8IV50 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LYSMD2Q8IV50 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.98■□□□□ 0.95
LYSMD2Q8IV50 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LYSMD2Q8IV50 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LYSMD2Q8IV50 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
LYSMD2Q8IV50 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LYSMD2Q8IV50 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
LYSMD2Q8IV50 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LYSMD2Q8IV50 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LYSMD2Q8IV50 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LYSMD2Q8IV50 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LYSMD2Q8IV50 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LYSMD2Q8IV50 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LYSMD2Q8IV50 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LYSMD2Q8IV50 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
LYSMD2Q8IV50 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms