Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.89■■□□□ 1.41
CAPNS1P04632 AC145676.1-201ENST00000514988 2004 ntBASIC23.89■■□□□ 1.41
CAPNS1P04632 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CAPNS1P04632 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CAPNS1P04632 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
CAPNS1P04632 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.88■■□□□ 1.41
CAPNS1P04632 PRTG-204ENST00000561292 833 ntTSL 3 BASIC23.88■■□□□ 1.41
CAPNS1P04632 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
CAPNS1P04632 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CAPNS1P04632 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
CAPNS1P04632 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.88■■□□□ 1.41
CAPNS1P04632 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CAPNS1P04632 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CAPNS1P04632 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.87■■□□□ 1.41
CAPNS1P04632 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CAPNS1P04632 AC025884.2-201ENST00000553429 711 ntBASIC23.87■■□□□ 1.41
CAPNS1P04632 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC23.87■■□□□ 1.41
CAPNS1P04632 RAP2CP1-202ENST00000605179 643 ntBASIC23.87■■□□□ 1.41
CAPNS1P04632 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.86■■□□□ 1.41
CAPNS1P04632 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CAPNS1P04632 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CAPNS1P04632 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.86■■□□□ 1.41
CAPNS1P04632 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
CAPNS1P04632 MIR6765-201ENST00000614092 87 ntBASIC23.86■■□□□ 1.41
CAPNS1P04632 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.86■■□□□ 1.41
CAPNS1P04632 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CAPNS1P04632 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
CAPNS1P04632 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CAPNS1P04632 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC23.85■■□□□ 1.41
CAPNS1P04632 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CAPNS1P04632 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
CAPNS1P04632 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
CAPNS1P04632 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.85■■□□□ 1.41
CAPNS1P04632 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CAPNS1P04632 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
CAPNS1P04632 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.83■■□□□ 1.41
CAPNS1P04632 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CAPNS1P04632 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC23.83■■□□□ 1.41
CAPNS1P04632 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.83■■□□□ 1.4
CAPNS1P04632 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
CAPNS1P04632 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
CAPNS1P04632 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CAPNS1P04632 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CAPNS1P04632 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC23.82■■□□□ 1.4
CAPNS1P04632 AC103724.3-201ENST00000564481 992 ntBASIC23.82■■□□□ 1.4
CAPNS1P04632 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
CAPNS1P04632 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC23.81■■□□□ 1.4
CAPNS1P04632 AC139795.1-202ENST00000500444 432 ntBASIC23.81■■□□□ 1.4
CAPNS1P04632 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
CAPNS1P04632 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC23.81■■□□□ 1.4
CAPNS1P04632 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CAPNS1P04632 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CAPNS1P04632 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CAPNS1P04632 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
CAPNS1P04632 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CAPNS1P04632 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.8■■□□□ 1.4
CAPNS1P04632 AC008406.3-201ENST00000620001 1374 ntBASIC23.8■■□□□ 1.4
CAPNS1P04632 IDNK-201ENST00000376417 511 ntTSL 5 BASIC23.8■■□□□ 1.4
CAPNS1P04632 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CAPNS1P04632 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
CAPNS1P04632 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
CAPNS1P04632 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.79■■□□□ 1.4
CAPNS1P04632 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CAPNS1P04632 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
CAPNS1P04632 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.79■■□□□ 1.4
CAPNS1P04632 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.78■■□□□ 1.4
CAPNS1P04632 MIR638-201ENST00000385237 100 ntBASIC23.78■■□□□ 1.4
CAPNS1P04632 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.78■■□□□ 1.4
CAPNS1P04632 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CAPNS1P04632 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CAPNS1P04632 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CAPNS1P04632 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CAPNS1P04632 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC23.77■■□□□ 1.4
CAPNS1P04632 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC23.77■■□□□ 1.4
CAPNS1P04632 AC093536.1-201ENST00000569153 554 ntBASIC23.76■■□□□ 1.39
CAPNS1P04632 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.76■■□□□ 1.39
CAPNS1P04632 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CAPNS1P04632 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.76■■□□□ 1.39
CAPNS1P04632 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.76■■□□□ 1.39
CAPNS1P04632 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CAPNS1P04632 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
CAPNS1P04632 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CAPNS1P04632 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.75■■□□□ 1.39
CAPNS1P04632 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CAPNS1P04632 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
CAPNS1P04632 PEMT-206ENST00000435340 960 ntTSL 5 BASIC23.75■■□□□ 1.39
CAPNS1P04632 AL031848.2-201ENST00000607670 837 ntBASIC23.75■■□□□ 1.39
CAPNS1P04632 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CAPNS1P04632 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CAPNS1P04632 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CAPNS1P04632 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
CAPNS1P04632 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.74■■□□□ 1.39
CAPNS1P04632 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.74■■□□□ 1.39
CAPNS1P04632 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC23.74■■□□□ 1.39
CAPNS1P04632 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
CAPNS1P04632 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC23.74■■□□□ 1.39
CAPNS1P04632 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
CAPNS1P04632 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CAPNS1P04632 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
CAPNS1P04632 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms