Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.09■□□□□ 0.49
AP1S3Q96PC3 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
AP1S3Q96PC3 EI24-212ENST00000615917 1407 ntTSL 2 BASIC18.09■□□□□ 0.49
AP1S3Q96PC3 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP1S3Q96PC3 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP1S3Q96PC3 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP1S3Q96PC3 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
AP1S3Q96PC3 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
AP1S3Q96PC3 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
AP1S3Q96PC3 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC18.09■□□□□ 0.49
AP1S3Q96PC3 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP1S3Q96PC3 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC18.09■□□□□ 0.49
AP1S3Q96PC3 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP1S3Q96PC3 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC18.09■□□□□ 0.49
AP1S3Q96PC3 WHAMMP2-203ENST00000563942 1603 ntBASIC18.09■□□□□ 0.49
AP1S3Q96PC3 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP1S3Q96PC3 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC18.08■□□□□ 0.49
AP1S3Q96PC3 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC18.08■□□□□ 0.49
AP1S3Q96PC3 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
AP1S3Q96PC3 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
AP1S3Q96PC3 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
AP1S3Q96PC3 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC18.08■□□□□ 0.49
AP1S3Q96PC3 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
AP1S3Q96PC3 CHML-205ENST00000638160 705 ntTSL 3 BASIC18.08■□□□□ 0.48
AP1S3Q96PC3 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC18.08■□□□□ 0.48
AP1S3Q96PC3 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
AP1S3Q96PC3 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
AP1S3Q96PC3 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
AP1S3Q96PC3 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
AP1S3Q96PC3 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
AP1S3Q96PC3 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
AP1S3Q96PC3 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP1S3Q96PC3 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP1S3Q96PC3 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP1S3Q96PC3 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC18.07■□□□□ 0.48
AP1S3Q96PC3 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC18.07■□□□□ 0.48
AP1S3Q96PC3 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP1S3Q96PC3 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP1S3Q96PC3 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
AP1S3Q96PC3 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
AP1S3Q96PC3 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP1S3Q96PC3 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP1S3Q96PC3 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP1S3Q96PC3 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC18.06■□□□□ 0.48
AP1S3Q96PC3 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC18.06■□□□□ 0.48
AP1S3Q96PC3 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
AP1S3Q96PC3 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
AP1S3Q96PC3 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
AP1S3Q96PC3 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
AP1S3Q96PC3 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC18.05■□□□□ 0.48
AP1S3Q96PC3 AC108673.1-201ENST00000510422 1159 ntBASIC18.05■□□□□ 0.48
AP1S3Q96PC3 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC18.05■□□□□ 0.48
AP1S3Q96PC3 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
AP1S3Q96PC3 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
AP1S3Q96PC3 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
AP1S3Q96PC3 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP1S3Q96PC3 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP1S3Q96PC3 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP1S3Q96PC3 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP1S3Q96PC3 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
AP1S3Q96PC3 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP1S3Q96PC3 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP1S3Q96PC3 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP1S3Q96PC3 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP1S3Q96PC3 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP1S3Q96PC3 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP1S3Q96PC3 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
AP1S3Q96PC3 LINC00273-201ENST00000539813 1452 ntBASIC18.03■□□□□ 0.48
AP1S3Q96PC3 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP1S3Q96PC3 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
AP1S3Q96PC3 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP1S3Q96PC3 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
AP1S3Q96PC3 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP1S3Q96PC3 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
AP1S3Q96PC3 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
AP1S3Q96PC3 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
AP1S3Q96PC3 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
AP1S3Q96PC3 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
AP1S3Q96PC3 AC005559.1-201ENST00000589661 871 ntBASIC18.02■□□□□ 0.48
AP1S3Q96PC3 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.02■□□□□ 0.48
AP1S3Q96PC3 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
AP1S3Q96PC3 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18.02■□□□□ 0.47
AP1S3Q96PC3 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP1S3Q96PC3 AC020928.2-201ENST00000588717 2197 ntBASIC18.01■□□□□ 0.47
AP1S3Q96PC3 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP1S3Q96PC3 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.01■□□□□ 0.47
AP1S3Q96PC3 AC092803.2-201ENST00000564287 1899 ntBASIC18.01■□□□□ 0.47
AP1S3Q96PC3 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC18.01■□□□□ 0.47
AP1S3Q96PC3 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP1S3Q96PC3 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
AP1S3Q96PC3 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP1S3Q96PC3 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP1S3Q96PC3 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC18.01■□□□□ 0.47
AP1S3Q96PC3 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
AP1S3Q96PC3 DUSP8P4-201ENST00000399538 1761 ntBASIC18.01■□□□□ 0.47
AP1S3Q96PC3 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
AP1S3Q96PC3 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP1S3Q96PC3 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
AP1S3Q96PC3 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
AP1S3Q96PC3 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms