Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.76■■□□□ 1.07
HPS1Q92902 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.76■■□□□ 1.07
HPS1Q92902 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.76■■□□□ 1.07
HPS1Q92902 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.75■■□□□ 1.07
HPS1Q92902 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.75■■□□□ 1.07
HPS1Q92902 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HPS1Q92902 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HPS1Q92902 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
HPS1Q92902 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
HPS1Q92902 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HPS1Q92902 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
HPS1Q92902 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HPS1Q92902 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.74■■□□□ 1.07
HPS1Q92902 HSD17B1P1-201ENST00000590052 955 ntBASIC21.74■■□□□ 1.07
HPS1Q92902 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HPS1Q92902 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.74■■□□□ 1.07
HPS1Q92902 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
HPS1Q92902 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.74■■□□□ 1.07
HPS1Q92902 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
HPS1Q92902 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
HPS1Q92902 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HPS1Q92902 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HPS1Q92902 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
HPS1Q92902 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
HPS1Q92902 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
HPS1Q92902 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
HPS1Q92902 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HPS1Q92902 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HPS1Q92902 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HPS1Q92902 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HPS1Q92902 AC068473.5-201ENST00000616428 2072 ntBASIC21.72■■□□□ 1.07
HPS1Q92902 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
HPS1Q92902 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.72■■□□□ 1.07
HPS1Q92902 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.72■■□□□ 1.07
HPS1Q92902 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HPS1Q92902 ERN1-208ENST00000606895 2068 ntBASIC21.71■■□□□ 1.07
HPS1Q92902 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HPS1Q92902 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.71■■□□□ 1.07
HPS1Q92902 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HPS1Q92902 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HPS1Q92902 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
HPS1Q92902 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
HPS1Q92902 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HPS1Q92902 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.7■■□□□ 1.06
HPS1Q92902 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HPS1Q92902 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HPS1Q92902 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
HPS1Q92902 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
HPS1Q92902 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
HPS1Q92902 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HPS1Q92902 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
HPS1Q92902 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HPS1Q92902 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HPS1Q92902 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HPS1Q92902 AC135983.2-203ENST00000454486 1613 ntBASIC21.69■■□□□ 1.06
HPS1Q92902 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
HPS1Q92902 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HPS1Q92902 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.68■■□□□ 1.06
HPS1Q92902 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HPS1Q92902 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HPS1Q92902 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HPS1Q92902 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
HPS1Q92902 DUSP8P4-201ENST00000399538 1761 ntBASIC21.68■■□□□ 1.06
HPS1Q92902 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HPS1Q92902 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
HPS1Q92902 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
HPS1Q92902 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
HPS1Q92902 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
HPS1Q92902 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HPS1Q92902 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.67■■□□□ 1.06
HPS1Q92902 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.67■■□□□ 1.06
HPS1Q92902 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HPS1Q92902 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
HPS1Q92902 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
HPS1Q92902 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.66■■□□□ 1.06
HPS1Q92902 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
HPS1Q92902 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HPS1Q92902 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
HPS1Q92902 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HPS1Q92902 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HPS1Q92902 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.65■■□□□ 1.06
HPS1Q92902 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
HPS1Q92902 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HPS1Q92902 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.64■■□□□ 1.06
HPS1Q92902 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
HPS1Q92902 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
HPS1Q92902 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.64■■□□□ 1.06
HPS1Q92902 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
HPS1Q92902 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
HPS1Q92902 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
HPS1Q92902 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
HPS1Q92902 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HPS1Q92902 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
HPS1Q92902 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.64■■□□□ 1.05
HPS1Q92902 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HPS1Q92902 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
HPS1Q92902 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
HPS1Q92902 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.63■■□□□ 1.05
HPS1Q92902 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HPS1Q92902 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms