Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
VPS52Q8N1B4 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
VPS52Q8N1B4 IDNK-201ENST00000376417 511 ntTSL 5 BASIC26.18■■□□□ 1.78
VPS52Q8N1B4 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
VPS52Q8N1B4 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
VPS52Q8N1B4 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
VPS52Q8N1B4 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
VPS52Q8N1B4 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
VPS52Q8N1B4 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
VPS52Q8N1B4 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
VPS52Q8N1B4 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
VPS52Q8N1B4 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
VPS52Q8N1B4 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
VPS52Q8N1B4 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
VPS52Q8N1B4 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
VPS52Q8N1B4 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC26.15■■□□□ 1.78
VPS52Q8N1B4 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC26.15■■□□□ 1.78
VPS52Q8N1B4 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
VPS52Q8N1B4 MTX2-204ENST00000443241 799 ntTSL 3 BASIC26.15■■□□□ 1.78
VPS52Q8N1B4 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
VPS52Q8N1B4 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
VPS52Q8N1B4 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC26.15■■□□□ 1.78
VPS52Q8N1B4 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
VPS52Q8N1B4 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
VPS52Q8N1B4 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
VPS52Q8N1B4 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC26.14■■□□□ 1.78
VPS52Q8N1B4 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC26.14■■□□□ 1.78
VPS52Q8N1B4 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC26.14■■□□□ 1.77
VPS52Q8N1B4 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
VPS52Q8N1B4 HES6-204ENST00000409182 863 ntTSL 2 BASIC26.13■■□□□ 1.77
VPS52Q8N1B4 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
VPS52Q8N1B4 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
VPS52Q8N1B4 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC26.13■■□□□ 1.77
VPS52Q8N1B4 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
VPS52Q8N1B4 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC26.12■■□□□ 1.77
VPS52Q8N1B4 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
VPS52Q8N1B4 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
VPS52Q8N1B4 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
VPS52Q8N1B4 AC103724.3-201ENST00000564481 992 ntBASIC26.11■■□□□ 1.77
VPS52Q8N1B4 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
VPS52Q8N1B4 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC26.11■■□□□ 1.77
VPS52Q8N1B4 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC26.1■■□□□ 1.77
VPS52Q8N1B4 BX255925.1-201ENST00000566954 1854 ntBASIC26.1■■□□□ 1.77
VPS52Q8N1B4 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
VPS52Q8N1B4 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
VPS52Q8N1B4 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
VPS52Q8N1B4 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC26.09■■□□□ 1.77
VPS52Q8N1B4 AL031848.2-201ENST00000607670 837 ntBASIC26.09■■□□□ 1.77
VPS52Q8N1B4 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
VPS52Q8N1B4 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
VPS52Q8N1B4 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC26.08■■□□□ 1.77
VPS52Q8N1B4 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC26.08■■□□□ 1.77
VPS52Q8N1B4 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
VPS52Q8N1B4 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
VPS52Q8N1B4 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.77
VPS52Q8N1B4 OR2A1-AS1-204ENST00000470435 602 ntBASIC26.08■■□□□ 1.77
VPS52Q8N1B4 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
VPS52Q8N1B4 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
VPS52Q8N1B4 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
VPS52Q8N1B4 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
VPS52Q8N1B4 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC26.07■■□□□ 1.76
VPS52Q8N1B4 GUSBP5-201ENST00000418136 578 ntBASIC26.07■■□□□ 1.76
VPS52Q8N1B4 PRTG-204ENST00000561292 833 ntTSL 3 BASIC26.07■■□□□ 1.76
VPS52Q8N1B4 AC087393.1-201ENST00000582896 145 ntBASIC26.07■■□□□ 1.76
VPS52Q8N1B4 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
VPS52Q8N1B4 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
VPS52Q8N1B4 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
VPS52Q8N1B4 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
VPS52Q8N1B4 AC019171.1-201ENST00000601251 1056 ntBASIC26.06■■□□□ 1.76
VPS52Q8N1B4 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
VPS52Q8N1B4 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC26.06■■□□□ 1.76
VPS52Q8N1B4 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
VPS52Q8N1B4 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
VPS52Q8N1B4 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC26.05■■□□□ 1.76
VPS52Q8N1B4 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
VPS52Q8N1B4 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
VPS52Q8N1B4 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
VPS52Q8N1B4 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC26.05■■□□□ 1.76
VPS52Q8N1B4 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
VPS52Q8N1B4 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
VPS52Q8N1B4 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
VPS52Q8N1B4 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
VPS52Q8N1B4 AL592295.1-201ENST00000400984 884 ntBASIC26.04■■□□□ 1.76
VPS52Q8N1B4 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
VPS52Q8N1B4 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
VPS52Q8N1B4 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC26.04■■□□□ 1.76
VPS52Q8N1B4 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
VPS52Q8N1B4 AC131212.1-201ENST00000613771 668 ntBASIC26.03■■□□□ 1.76
VPS52Q8N1B4 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
VPS52Q8N1B4 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
VPS52Q8N1B4 RPS2P7-201ENST00000447334 885 ntBASIC26.02■■□□□ 1.76
VPS52Q8N1B4 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC26.02■■□□□ 1.76
VPS52Q8N1B4 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
VPS52Q8N1B4 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
VPS52Q8N1B4 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
VPS52Q8N1B4 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
VPS52Q8N1B4 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC26.01■■□□□ 1.75
VPS52Q8N1B4 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC26.01■■□□□ 1.75
VPS52Q8N1B4 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC26.01■■□□□ 1.75
VPS52Q8N1B4 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC26.01■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms