Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PTCHD4Q6ZW05 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PTCHD4Q6ZW05 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PTCHD4Q6ZW05 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PTCHD4Q6ZW05 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PTCHD4Q6ZW05 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PTCHD4Q6ZW05 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PTCHD4Q6ZW05 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PTCHD4Q6ZW05 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
PTCHD4Q6ZW05 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PTCHD4Q6ZW05 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC22.05■■□□□ 1.12
PTCHD4Q6ZW05 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PTCHD4Q6ZW05 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC22.05■■□□□ 1.12
PTCHD4Q6ZW05 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
PTCHD4Q6ZW05 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PTCHD4Q6ZW05 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PTCHD4Q6ZW05 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PTCHD4Q6ZW05 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC22.04■■□□□ 1.12
PTCHD4Q6ZW05 AC138932.3-201ENST00000567634 1902 ntBASIC22.04■■□□□ 1.12
PTCHD4Q6ZW05 CHST11-202ENST00000546689 756 ntTSL 2 BASIC22.04■■□□□ 1.12
PTCHD4Q6ZW05 DUX4L11-201ENST00000611504 1267 ntBASIC22.04■■□□□ 1.12
PTCHD4Q6ZW05 DUX4L12-201ENST00000614593 1267 ntBASIC22.04■■□□□ 1.12
PTCHD4Q6ZW05 DUX4L14-201ENST00000621227 1267 ntBASIC22.04■■□□□ 1.12
PTCHD4Q6ZW05 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PTCHD4Q6ZW05 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PTCHD4Q6ZW05 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PTCHD4Q6ZW05 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
PTCHD4Q6ZW05 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
PTCHD4Q6ZW05 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
PTCHD4Q6ZW05 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
PTCHD4Q6ZW05 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC22.03■■□□□ 1.12
PTCHD4Q6ZW05 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC22.03■■□□□ 1.12
PTCHD4Q6ZW05 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PTCHD4Q6ZW05 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC22.03■■□□□ 1.12
PTCHD4Q6ZW05 AL139125.2-201ENST00000623134 1869 ntBASIC22.03■■□□□ 1.12
PTCHD4Q6ZW05 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
PTCHD4Q6ZW05 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22.02■■□□□ 1.12
PTCHD4Q6ZW05 PREB-202ENST00000406567 1910 ntTSL 5 BASIC22.02■■□□□ 1.12
PTCHD4Q6ZW05 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PTCHD4Q6ZW05 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC22.02■■□□□ 1.12
PTCHD4Q6ZW05 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PTCHD4Q6ZW05 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PTCHD4Q6ZW05 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC22.02■■□□□ 1.11
PTCHD4Q6ZW05 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PTCHD4Q6ZW05 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PTCHD4Q6ZW05 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC22.01■■□□□ 1.11
PTCHD4Q6ZW05 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.01■■□□□ 1.11
PTCHD4Q6ZW05 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC22.01■■□□□ 1.11
PTCHD4Q6ZW05 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PTCHD4Q6ZW05 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22■■□□□ 1.11
PTCHD4Q6ZW05 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC22■■□□□ 1.11
PTCHD4Q6ZW05 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC22■■□□□ 1.11
PTCHD4Q6ZW05 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC22■■□□□ 1.11
PTCHD4Q6ZW05 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PTCHD4Q6ZW05 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
PTCHD4Q6ZW05 MLEC-202ENST00000412616 841 ntTSL 3 BASIC22■■□□□ 1.11
PTCHD4Q6ZW05 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
PTCHD4Q6ZW05 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC22■■□□□ 1.11
PTCHD4Q6ZW05 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC22■■□□□ 1.11
PTCHD4Q6ZW05 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
PTCHD4Q6ZW05 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PTCHD4Q6ZW05 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PTCHD4Q6ZW05 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PTCHD4Q6ZW05 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.99■■□□□ 1.11
PTCHD4Q6ZW05 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.99■■□□□ 1.11
PTCHD4Q6ZW05 ZNRF2P2-203ENST00000454624 420 ntBASIC21.99■■□□□ 1.11
PTCHD4Q6ZW05 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PTCHD4Q6ZW05 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PTCHD4Q6ZW05 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PTCHD4Q6ZW05 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
PTCHD4Q6ZW05 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.99■■□□□ 1.11
PTCHD4Q6ZW05 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.99■■□□□ 1.11
PTCHD4Q6ZW05 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
PTCHD4Q6ZW05 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PTCHD4Q6ZW05 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PTCHD4Q6ZW05 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PTCHD4Q6ZW05 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.98■■□□□ 1.11
PTCHD4Q6ZW05 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PTCHD4Q6ZW05 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.97■■□□□ 1.11
PTCHD4Q6ZW05 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PTCHD4Q6ZW05 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PTCHD4Q6ZW05 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PTCHD4Q6ZW05 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
PTCHD4Q6ZW05 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
PTCHD4Q6ZW05 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
PTCHD4Q6ZW05 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
PTCHD4Q6ZW05 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PTCHD4Q6ZW05 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
PTCHD4Q6ZW05 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PTCHD4Q6ZW05 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PTCHD4Q6ZW05 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PTCHD4Q6ZW05 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
PTCHD4Q6ZW05 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PTCHD4Q6ZW05 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
PTCHD4Q6ZW05 AC008813.1-201ENST00000536597 885 ntBASIC21.96■■□□□ 1.11
PTCHD4Q6ZW05 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.96■■□□□ 1.11
PTCHD4Q6ZW05 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.96■■□□□ 1.11
PTCHD4Q6ZW05 MIR219A2-201ENST00000608502 1504 ntBASIC21.96■■□□□ 1.11
PTCHD4Q6ZW05 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.11
PTCHD4Q6ZW05 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms