Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC29.34■■■□□ 2.29
CNTNAP1P78357 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC29.34■■■□□ 2.29
CNTNAP1P78357 AC131281.2-201ENST00000520478 145 ntBASIC29.34■■■□□ 2.29
CNTNAP1P78357 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC29.34■■■□□ 2.29
CNTNAP1P78357 AC005837.3-201ENST00000612163 286 ntBASIC29.34■■■□□ 2.29
CNTNAP1P78357 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC29.33■■■□□ 2.29
CNTNAP1P78357 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
CNTNAP1P78357 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC29.33■■■□□ 2.29
CNTNAP1P78357 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC29.33■■■□□ 2.29
CNTNAP1P78357 AC110285.6-201ENST00000617652 491 ntBASIC29.33■■■□□ 2.29
CNTNAP1P78357 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC29.32■■■□□ 2.28
CNTNAP1P78357 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC29.32■■■□□ 2.28
CNTNAP1P78357 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC29.32■■■□□ 2.28
CNTNAP1P78357 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC29.32■■■□□ 2.28
CNTNAP1P78357 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CNTNAP1P78357 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CNTNAP1P78357 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
CNTNAP1P78357 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC29.31■■■□□ 2.28
CNTNAP1P78357 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
CNTNAP1P78357 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC29.3■■■□□ 2.28
CNTNAP1P78357 TRIR-202ENST00000588213 841 ntTSL 3 BASIC29.3■■■□□ 2.28
CNTNAP1P78357 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC29.3■■■□□ 2.28
CNTNAP1P78357 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
CNTNAP1P78357 ST7-205ENST00000393446 2114 ntTSL 5 BASIC29.3■■■□□ 2.28
CNTNAP1P78357 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC29.29■■■□□ 2.28
CNTNAP1P78357 BX664725.1-201ENST00000438252 379 ntBASIC29.29■■■□□ 2.28
CNTNAP1P78357 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC29.29■■■□□ 2.28
CNTNAP1P78357 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CNTNAP1P78357 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CNTNAP1P78357 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC29.29■■■□□ 2.28
CNTNAP1P78357 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC29.28■■■□□ 2.28
CNTNAP1P78357 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC29.28■■■□□ 2.28
CNTNAP1P78357 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC29.28■■■□□ 2.28
CNTNAP1P78357 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
CNTNAP1P78357 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
CNTNAP1P78357 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC29.28■■■□□ 2.28
CNTNAP1P78357 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC29.27■■■□□ 2.28
CNTNAP1P78357 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
CNTNAP1P78357 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC29.27■■■□□ 2.28
CNTNAP1P78357 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
CNTNAP1P78357 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC29.27■■■□□ 2.28
CNTNAP1P78357 GUK1-205ENST00000366722 850 ntTSL 3 BASIC29.26■■■□□ 2.28
CNTNAP1P78357 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC29.26■■■□□ 2.28
CNTNAP1P78357 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
CNTNAP1P78357 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC29.26■■■□□ 2.27
CNTNAP1P78357 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC29.25■■■□□ 2.27
CNTNAP1P78357 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
CNTNAP1P78357 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
CNTNAP1P78357 AL136116.3-201ENST00000402907 1138 ntBASIC29.25■■■□□ 2.27
CNTNAP1P78357 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC29.25■■■□□ 2.27
CNTNAP1P78357 AC104564.3-201ENST00000582367 638 ntBASIC29.25■■■□□ 2.27
CNTNAP1P78357 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC29.25■■■□□ 2.27
CNTNAP1P78357 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
CNTNAP1P78357 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC29.24■■■□□ 2.27
CNTNAP1P78357 PROC-203ENST00000409048 1586 ntTSL 5 BASIC29.24■■■□□ 2.27
CNTNAP1P78357 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
CNTNAP1P78357 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
CNTNAP1P78357 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
CNTNAP1P78357 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
CNTNAP1P78357 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
CNTNAP1P78357 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC29.23■■■□□ 2.27
CNTNAP1P78357 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC29.22■■■□□ 2.27
CNTNAP1P78357 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC29.22■■■□□ 2.27
CNTNAP1P78357 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
CNTNAP1P78357 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC29.22■■■□□ 2.27
CNTNAP1P78357 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC29.22■■■□□ 2.27
CNTNAP1P78357 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
CNTNAP1P78357 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC29.21■■■□□ 2.27
CNTNAP1P78357 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
CNTNAP1P78357 RPP21-222ENST00000433076 577 ntTSL 2 BASIC29.21■■■□□ 2.27
CNTNAP1P78357 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC29.21■■■□□ 2.27
CNTNAP1P78357 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC29.2■■■□□ 2.27
CNTNAP1P78357 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
CNTNAP1P78357 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
CNTNAP1P78357 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC29.19■■■□□ 2.26
CNTNAP1P78357 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC29.19■■■□□ 2.26
CNTNAP1P78357 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
CNTNAP1P78357 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC29.18■■■□□ 2.26
CNTNAP1P78357 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC29.18■■■□□ 2.26
CNTNAP1P78357 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC29.18■■■□□ 2.26
CNTNAP1P78357 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC29.18■■■□□ 2.26
CNTNAP1P78357 AC087393.1-201ENST00000582896 145 ntBASIC29.18■■■□□ 2.26
CNTNAP1P78357 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC29.18■■■□□ 2.26
CNTNAP1P78357 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
CNTNAP1P78357 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC29.17■■■□□ 2.26
CNTNAP1P78357 AC026271.2-201ENST00000428091 497 ntBASIC29.17■■■□□ 2.26
CNTNAP1P78357 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
CNTNAP1P78357 SRR-208ENST00000576848 588 ntTSL 4 BASIC29.17■■■□□ 2.26
CNTNAP1P78357 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC29.17■■■□□ 2.26
CNTNAP1P78357 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC29.17■■■□□ 2.26
CNTNAP1P78357 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC29.15■■■□□ 2.26
CNTNAP1P78357 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC29.15■■■□□ 2.26
CNTNAP1P78357 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC29.15■■■□□ 2.26
CNTNAP1P78357 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
CNTNAP1P78357 ST7-202ENST00000323984 2142 ntTSL 5 BASIC29.15■■■□□ 2.26
CNTNAP1P78357 ST7-207ENST00000393449 2127 ntTSL 5 BASIC29.15■■■□□ 2.26
CNTNAP1P78357 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
CNTNAP1P78357 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC29.14■■■□□ 2.26
CNTNAP1P78357 ZNRF2P3-201ENST00000424200 374 ntBASIC29.14■■■□□ 2.26
CNTNAP1P78357 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC29.14■■■□□ 2.26
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms