Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.06■□□□□ 0.96
CCL2P13500 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCL2P13500 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.06■□□□□ 0.96
CCL2P13500 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCL2P13500 AC026202.3-201ENST00000600805 1127 ntBASIC21.06■□□□□ 0.96
CCL2P13500 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCL2P13500 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CCL2P13500 ERN1-208ENST00000606895 2068 ntBASIC21.06■□□□□ 0.96
CCL2P13500 AC009831.1-201ENST00000580420 1582 ntBASIC21.06■□□□□ 0.96
CCL2P13500 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCL2P13500 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCL2P13500 AC091060.1-201ENST00000623524 1766 ntBASIC21.05■□□□□ 0.96
CCL2P13500 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCL2P13500 AC092803.2-201ENST00000564287 1899 ntBASIC21.05■□□□□ 0.96
CCL2P13500 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCL2P13500 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCL2P13500 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCL2P13500 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CCL2P13500 ABHD17AP5-201ENST00000580133 923 ntBASIC21.05■□□□□ 0.96
CCL2P13500 AC133552.2-201ENST00000619106 1032 ntBASIC21.05■□□□□ 0.96
CCL2P13500 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCL2P13500 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCL2P13500 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.05■□□□□ 0.96
CCL2P13500 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.04■□□□□ 0.96
CCL2P13500 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.04■□□□□ 0.96
CCL2P13500 U85056.1-201ENST00000616429 682 ntBASIC21.04■□□□□ 0.96
CCL2P13500 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.04■□□□□ 0.96
CCL2P13500 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.04■□□□□ 0.96
CCL2P13500 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCL2P13500 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCL2P13500 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.03■□□□□ 0.96
CCL2P13500 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.03■□□□□ 0.96
CCL2P13500 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCL2P13500 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CCL2P13500 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCL2P13500 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
CCL2P13500 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.03■□□□□ 0.96
CCL2P13500 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCL2P13500 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCL2P13500 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCL2P13500 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.02■□□□□ 0.96
CCL2P13500 RAP2CP1-202ENST00000605179 643 ntBASIC21.02■□□□□ 0.96
CCL2P13500 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCL2P13500 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCL2P13500 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCL2P13500 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCL2P13500 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.01■□□□□ 0.95
CCL2P13500 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCL2P13500 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCL2P13500 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CCL2P13500 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCL2P13500 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21■□□□□ 0.95
CCL2P13500 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
CCL2P13500 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCL2P13500 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCL2P13500 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.99■□□□□ 0.95
CCL2P13500 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCL2P13500 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCL2P13500 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCL2P13500 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCL2P13500 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCL2P13500 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.99■□□□□ 0.95
CCL2P13500 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.98■□□□□ 0.95
CCL2P13500 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.98■□□□□ 0.95
CCL2P13500 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCL2P13500 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.98■□□□□ 0.95
CCL2P13500 AL592293.1-201ENST00000502889 1188 ntBASIC20.98■□□□□ 0.95
CCL2P13500 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CCL2P13500 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.98■□□□□ 0.95
CCL2P13500 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCL2P13500 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCL2P13500 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.97■□□□□ 0.95
CCL2P13500 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
CCL2P13500 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.97■□□□□ 0.95
CCL2P13500 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCL2P13500 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCL2P13500 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCL2P13500 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCL2P13500 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.96■□□□□ 0.95
CCL2P13500 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCL2P13500 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCL2P13500 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCL2P13500 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CCL2P13500 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCL2P13500 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCL2P13500 NTF6A-201ENST00000591175 560 ntBASIC20.95■□□□□ 0.94
CCL2P13500 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.95■□□□□ 0.94
CCL2P13500 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.95■□□□□ 0.94
CCL2P13500 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCL2P13500 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCL2P13500 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCL2P13500 AC145676.1-201ENST00000514988 2004 ntBASIC20.94■□□□□ 0.94
CCL2P13500 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCL2P13500 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCL2P13500 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCL2P13500 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.94■□□□□ 0.94
CCL2P13500 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.93■□□□□ 0.94
CCL2P13500 KRT18P60-201ENST00000312876 1297 ntBASIC20.93■□□□□ 0.94
CCL2P13500 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.93■□□□□ 0.94
CCL2P13500 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms