Protein–RNA interactions for Protein: P0C7M3

SFTA3, Surfactant-associated protein 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTA3P0C7M3 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
SFTA3P0C7M3 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC19.26■□□□□ 0.67
SFTA3P0C7M3 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SFTA3P0C7M3 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SFTA3P0C7M3 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
SFTA3P0C7M3 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SFTA3P0C7M3 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.26■□□□□ 0.67
SFTA3P0C7M3 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SFTA3P0C7M3 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.25■□□□□ 0.67
SFTA3P0C7M3 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SFTA3P0C7M3 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SFTA3P0C7M3 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC19.25■□□□□ 0.67
SFTA3P0C7M3 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC19.25■□□□□ 0.67
SFTA3P0C7M3 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SFTA3P0C7M3 WHAMMP3-201ENST00000611636 1609 ntBASIC19.25■□□□□ 0.67
SFTA3P0C7M3 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SFTA3P0C7M3 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SFTA3P0C7M3 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.24■□□□□ 0.67
SFTA3P0C7M3 DUSP8P5-201ENST00000422884 1815 ntBASIC19.24■□□□□ 0.67
SFTA3P0C7M3 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SFTA3P0C7M3 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SFTA3P0C7M3 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SFTA3P0C7M3 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SFTA3P0C7M3 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SFTA3P0C7M3 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SFTA3P0C7M3 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SFTA3P0C7M3 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.23■□□□□ 0.67
SFTA3P0C7M3 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SFTA3P0C7M3 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SFTA3P0C7M3 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.23■□□□□ 0.67
SFTA3P0C7M3 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SFTA3P0C7M3 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SFTA3P0C7M3 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.22■□□□□ 0.67
SFTA3P0C7M3 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
SFTA3P0C7M3 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SFTA3P0C7M3 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
SFTA3P0C7M3 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SFTA3P0C7M3 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SFTA3P0C7M3 WASH5P-204ENST00000632292 975 ntBASIC19.21■□□□□ 0.67
SFTA3P0C7M3 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SFTA3P0C7M3 LINC01124-201ENST00000409786 2117 ntBASIC19.21■□□□□ 0.67
SFTA3P0C7M3 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SFTA3P0C7M3 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SFTA3P0C7M3 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SFTA3P0C7M3 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SFTA3P0C7M3 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
SFTA3P0C7M3 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC19.2■□□□□ 0.66
SFTA3P0C7M3 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SFTA3P0C7M3 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SFTA3P0C7M3 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SFTA3P0C7M3 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.2■□□□□ 0.66
SFTA3P0C7M3 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SFTA3P0C7M3 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SFTA3P0C7M3 AC010501.1-201ENST00000606270 1962 ntBASIC19.19■□□□□ 0.66
SFTA3P0C7M3 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SFTA3P0C7M3 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SFTA3P0C7M3 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SFTA3P0C7M3 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.19■□□□□ 0.66
SFTA3P0C7M3 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SFTA3P0C7M3 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SFTA3P0C7M3 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SFTA3P0C7M3 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SFTA3P0C7M3 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SFTA3P0C7M3 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SFTA3P0C7M3 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SFTA3P0C7M3 AL133380.1-201ENST00000506013 324 ntBASIC19.18■□□□□ 0.66
SFTA3P0C7M3 RARRES2P7-201ENST00000567349 469 ntBASIC19.18■□□□□ 0.66
SFTA3P0C7M3 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SFTA3P0C7M3 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SFTA3P0C7M3 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SFTA3P0C7M3 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SFTA3P0C7M3 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SFTA3P0C7M3 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SFTA3P0C7M3 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.17■□□□□ 0.66
SFTA3P0C7M3 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
SFTA3P0C7M3 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.17■□□□□ 0.66
SFTA3P0C7M3 AL024507.2-201ENST00000606070 2574 ntBASIC19.17■□□□□ 0.66
SFTA3P0C7M3 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SFTA3P0C7M3 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SFTA3P0C7M3 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SFTA3P0C7M3 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SFTA3P0C7M3 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.16■□□□□ 0.66
SFTA3P0C7M3 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SFTA3P0C7M3 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SFTA3P0C7M3 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SFTA3P0C7M3 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC19.15■□□□□ 0.66
SFTA3P0C7M3 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SFTA3P0C7M3 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC19.15■□□□□ 0.66
SFTA3P0C7M3 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.15■□□□□ 0.66
SFTA3P0C7M3 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SFTA3P0C7M3 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.15■□□□□ 0.66
SFTA3P0C7M3 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SFTA3P0C7M3 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SFTA3P0C7M3 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.15■□□□□ 0.66
SFTA3P0C7M3 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SFTA3P0C7M3 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
SFTA3P0C7M3 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SFTA3P0C7M3 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SFTA3P0C7M3 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.14■□□□□ 0.65
SFTA3P0C7M3 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms