Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AC096887.2-201ENST00000623443 1957 ntBASIC21.17■□□□□ 0.98
UPK1BO75841 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
UPK1BO75841 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.17■□□□□ 0.98
UPK1BO75841 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
UPK1BO75841 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
UPK1BO75841 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
UPK1BO75841 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
UPK1BO75841 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
UPK1BO75841 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
UPK1BO75841 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
UPK1BO75841 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
UPK1BO75841 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
UPK1BO75841 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
UPK1BO75841 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
UPK1BO75841 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
UPK1BO75841 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
UPK1BO75841 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
UPK1BO75841 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.15■□□□□ 0.98
UPK1BO75841 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UPK1BO75841 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.15■□□□□ 0.98
UPK1BO75841 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UPK1BO75841 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.15■□□□□ 0.98
UPK1BO75841 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.15■□□□□ 0.98
UPK1BO75841 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
UPK1BO75841 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
UPK1BO75841 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
UPK1BO75841 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
UPK1BO75841 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
UPK1BO75841 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
UPK1BO75841 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
UPK1BO75841 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.13■□□□□ 0.97
UPK1BO75841 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
UPK1BO75841 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
UPK1BO75841 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
UPK1BO75841 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
UPK1BO75841 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
UPK1BO75841 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
UPK1BO75841 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
UPK1BO75841 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
UPK1BO75841 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
UPK1BO75841 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
UPK1BO75841 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC21.12■□□□□ 0.97
UPK1BO75841 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC21.12■□□□□ 0.97
UPK1BO75841 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
UPK1BO75841 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
UPK1BO75841 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.11■□□□□ 0.97
UPK1BO75841 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
UPK1BO75841 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
UPK1BO75841 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
UPK1BO75841 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
UPK1BO75841 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC21.11■□□□□ 0.97
UPK1BO75841 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
UPK1BO75841 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.11■□□□□ 0.97
UPK1BO75841 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
UPK1BO75841 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
UPK1BO75841 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
UPK1BO75841 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.11■□□□□ 0.97
UPK1BO75841 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
UPK1BO75841 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
UPK1BO75841 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
UPK1BO75841 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.09■□□□□ 0.97
UPK1BO75841 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
UPK1BO75841 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
UPK1BO75841 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
UPK1BO75841 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
UPK1BO75841 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UPK1BO75841 DYNLL1-208ENST00000550178 581 ntBASIC21.09■□□□□ 0.97
UPK1BO75841 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
UPK1BO75841 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UPK1BO75841 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UPK1BO75841 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
UPK1BO75841 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
UPK1BO75841 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.08■□□□□ 0.97
UPK1BO75841 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
UPK1BO75841 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
UPK1BO75841 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.08■□□□□ 0.96
UPK1BO75841 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.08■□□□□ 0.96
UPK1BO75841 AL117328.2-201ENST00000624617 1940 ntBASIC21.08■□□□□ 0.96
UPK1BO75841 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UPK1BO75841 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UPK1BO75841 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UPK1BO75841 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UPK1BO75841 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC21.07■□□□□ 0.96
UPK1BO75841 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UPK1BO75841 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
UPK1BO75841 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
UPK1BO75841 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UPK1BO75841 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
UPK1BO75841 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
UPK1BO75841 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
UPK1BO75841 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.05■□□□□ 0.96
UPK1BO75841 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UPK1BO75841 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.05■□□□□ 0.96
UPK1BO75841 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.05■□□□□ 0.96
UPK1BO75841 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
UPK1BO75841 AL024507.2-201ENST00000606070 2574 ntBASIC21.05■□□□□ 0.96
UPK1BO75841 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
UPK1BO75841 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UPK1BO75841 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.04■□□□□ 0.96
UPK1BO75841 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms