Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
PFDN1O60925 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PFDN1O60925 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
PFDN1O60925 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PFDN1O60925 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
PFDN1O60925 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
PFDN1O60925 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PFDN1O60925 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PFDN1O60925 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PFDN1O60925 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PFDN1O60925 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
PFDN1O60925 AL121603.2-201ENST00000557373 2117 ntBASIC21.73■■□□□ 1.07
PFDN1O60925 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
PFDN1O60925 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
PFDN1O60925 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
PFDN1O60925 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
PFDN1O60925 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.72■■□□□ 1.07
PFDN1O60925 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
PFDN1O60925 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PFDN1O60925 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
PFDN1O60925 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PFDN1O60925 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PFDN1O60925 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.71■■□□□ 1.07
PFDN1O60925 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PFDN1O60925 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PFDN1O60925 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PFDN1O60925 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PFDN1O60925 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PFDN1O60925 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PFDN1O60925 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PFDN1O60925 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PFDN1O60925 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
PFDN1O60925 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PFDN1O60925 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PFDN1O60925 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
PFDN1O60925 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
PFDN1O60925 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
PFDN1O60925 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PFDN1O60925 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
PFDN1O60925 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PFDN1O60925 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC21.68■■□□□ 1.06
PFDN1O60925 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PFDN1O60925 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PFDN1O60925 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.68■■□□□ 1.06
PFDN1O60925 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
PFDN1O60925 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.68■■□□□ 1.06
PFDN1O60925 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.68■■□□□ 1.06
PFDN1O60925 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PFDN1O60925 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PFDN1O60925 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.67■■□□□ 1.06
PFDN1O60925 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PFDN1O60925 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PFDN1O60925 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PFDN1O60925 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
PFDN1O60925 RNF165-205ENST00000588679 2904 ntBASIC21.66■■□□□ 1.06
PFDN1O60925 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PFDN1O60925 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PFDN1O60925 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PFDN1O60925 LINC00565-201ENST00000562710 2331 ntBASIC21.66■■□□□ 1.06
PFDN1O60925 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PFDN1O60925 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.65■■□□□ 1.06
PFDN1O60925 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
PFDN1O60925 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.65■■□□□ 1.06
PFDN1O60925 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PFDN1O60925 DUSP8P5-201ENST00000422884 1815 ntBASIC21.64■■□□□ 1.06
PFDN1O60925 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
PFDN1O60925 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PFDN1O60925 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PFDN1O60925 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC21.64■■□□□ 1.05
PFDN1O60925 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PFDN1O60925 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.63■■□□□ 1.05
PFDN1O60925 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
PFDN1O60925 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PFDN1O60925 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PFDN1O60925 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PFDN1O60925 AL117328.2-201ENST00000624617 1940 ntBASIC21.63■■□□□ 1.05
PFDN1O60925 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PFDN1O60925 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PFDN1O60925 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PFDN1O60925 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
PFDN1O60925 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
PFDN1O60925 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.62■■□□□ 1.05
PFDN1O60925 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PFDN1O60925 ABCB10P4-201ENST00000566803 2184 ntBASIC21.62■■□□□ 1.05
PFDN1O60925 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PFDN1O60925 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
PFDN1O60925 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PFDN1O60925 C1orf229-201ENST00000623686 2258 ntBASIC21.62■■□□□ 1.05
PFDN1O60925 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.62■■□□□ 1.05
PFDN1O60925 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.61■■□□□ 1.05
PFDN1O60925 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PFDN1O60925 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PFDN1O60925 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PFDN1O60925 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.61■■□□□ 1.05
PFDN1O60925 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PFDN1O60925 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PFDN1O60925 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PFDN1O60925 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PFDN1O60925 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PFDN1O60925 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms