Protein–RNA interactions for Protein: O43303

CCP110, Centriolar coiled-coil protein of 110 kDa, humanhuman

Predictions only

Length 1,012 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110O43303 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CCP110O43303 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
CCP110O43303 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
CCP110O43303 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
CCP110O43303 WHAMMP3-201ENST00000611636 1609 ntBASIC26.39■■□□□ 1.82
CCP110O43303 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC26.39■■□□□ 1.82
CCP110O43303 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
CCP110O43303 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.82
CCP110O43303 TMEM202-AS1-202ENST00000565181 2325 ntBASIC26.39■■□□□ 1.82
CCP110O43303 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CCP110O43303 AC138932.3-201ENST00000567634 1902 ntBASIC26.39■■□□□ 1.81
CCP110O43303 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.81
CCP110O43303 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC26.39■■□□□ 1.81
CCP110O43303 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC26.38■■□□□ 1.81
CCP110O43303 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC26.38■■□□□ 1.81
CCP110O43303 DUX4L11-201ENST00000611504 1267 ntBASIC26.38■■□□□ 1.81
CCP110O43303 DUX4L12-201ENST00000614593 1267 ntBASIC26.38■■□□□ 1.81
CCP110O43303 DUX4L14-201ENST00000621227 1267 ntBASIC26.38■■□□□ 1.81
CCP110O43303 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC26.38■■□□□ 1.81
CCP110O43303 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CCP110O43303 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CCP110O43303 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
CCP110O43303 DUX4L13-201ENST00000554103 1267 ntBASIC26.36■■□□□ 1.81
CCP110O43303 DUX4L15-201ENST00000611059 1267 ntBASIC26.36■■□□□ 1.81
CCP110O43303 DUX4L23-201ENST00000615195 1269 ntBASIC26.36■■□□□ 1.81
CCP110O43303 DUX4L24-201ENST00000617576 1269 ntBASIC26.36■■□□□ 1.81
CCP110O43303 DUX4L22-201ENST00000618238 1269 ntBASIC26.36■■□□□ 1.81
CCP110O43303 DUX4L20-201ENST00000619712 1269 ntBASIC26.36■■□□□ 1.81
CCP110O43303 DUX4L21-201ENST00000622058 1269 ntBASIC26.36■■□□□ 1.81
CCP110O43303 DUX4L10-201ENST00000622460 1267 ntBASIC26.36■■□□□ 1.81
CCP110O43303 DUX4L25-201ENST00000624915 1269 ntBASIC26.36■■□□□ 1.81
CCP110O43303 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CCP110O43303 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CCP110O43303 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CCP110O43303 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC26.36■■□□□ 1.81
CCP110O43303 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CCP110O43303 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
CCP110O43303 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CCP110O43303 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
CCP110O43303 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
CCP110O43303 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CCP110O43303 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CCP110O43303 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.35■■□□□ 1.81
CCP110O43303 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CCP110O43303 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC26.35■■□□□ 1.81
CCP110O43303 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CCP110O43303 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CCP110O43303 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CCP110O43303 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CCP110O43303 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CCP110O43303 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC26.34■■□□□ 1.81
CCP110O43303 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CCP110O43303 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CCP110O43303 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CCP110O43303 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
CCP110O43303 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CCP110O43303 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC26.32■■□□□ 1.8
CCP110O43303 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CCP110O43303 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC26.32■■□□□ 1.8
CCP110O43303 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC26.32■■□□□ 1.8
CCP110O43303 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CCP110O43303 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC26.32■■□□□ 1.8
CCP110O43303 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CCP110O43303 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CCP110O43303 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC26.31■■□□□ 1.8
CCP110O43303 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
CCP110O43303 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CCP110O43303 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC26.31■■□□□ 1.8
CCP110O43303 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC26.31■■□□□ 1.8
CCP110O43303 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCP110O43303 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCP110O43303 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
CCP110O43303 AC012676.1-201ENST00000574705 1949 ntBASIC26.3■■□□□ 1.8
CCP110O43303 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCP110O43303 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCP110O43303 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
CCP110O43303 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC26.29■■□□□ 1.8
CCP110O43303 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CCP110O43303 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC26.29■■□□□ 1.8
CCP110O43303 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC26.29■■□□□ 1.8
CCP110O43303 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.29■■□□□ 1.8
CCP110O43303 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
CCP110O43303 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC26.29■■□□□ 1.8
CCP110O43303 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CCP110O43303 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCP110O43303 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
CCP110O43303 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCP110O43303 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC26.28■■□□□ 1.8
CCP110O43303 CHST11-202ENST00000546689 756 ntTSL 2 BASIC26.27■■□□□ 1.8
CCP110O43303 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CCP110O43303 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC26.27■■□□□ 1.8
CCP110O43303 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CCP110O43303 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
CCP110O43303 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCP110O43303 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC26.26■■□□□ 1.79
CCP110O43303 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCP110O43303 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCP110O43303 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CCP110O43303 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC26.26■■□□□ 1.79
CCP110O43303 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC26.26■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms