Protein–RNA interactions for Protein: A6NI15

MSGN1, Mesogenin-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSGN1A6NI15 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
MSGN1A6NI15 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
MSGN1A6NI15 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.98■□□□□ 0.79
MSGN1A6NI15 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC19.98■□□□□ 0.79
MSGN1A6NI15 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
MSGN1A6NI15 LINC01971-201ENST00000617888 1048 ntBASIC19.97■□□□□ 0.79
MSGN1A6NI15 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.97■□□□□ 0.79
MSGN1A6NI15 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.97■□□□□ 0.79
MSGN1A6NI15 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MSGN1A6NI15 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC19.96■□□□□ 0.79
MSGN1A6NI15 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC19.96■□□□□ 0.79
MSGN1A6NI15 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.96■□□□□ 0.79
MSGN1A6NI15 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MSGN1A6NI15 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MSGN1A6NI15 AC012676.1-201ENST00000574705 1949 ntBASIC19.96■□□□□ 0.79
MSGN1A6NI15 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MSGN1A6NI15 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MSGN1A6NI15 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MSGN1A6NI15 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
MSGN1A6NI15 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC19.95■□□□□ 0.78
MSGN1A6NI15 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC19.95■□□□□ 0.78
MSGN1A6NI15 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MSGN1A6NI15 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
MSGN1A6NI15 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
MSGN1A6NI15 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
MSGN1A6NI15 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MSGN1A6NI15 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MSGN1A6NI15 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MSGN1A6NI15 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
MSGN1A6NI15 ZNRF2P2-203ENST00000454624 420 ntBASIC19.94■□□□□ 0.78
MSGN1A6NI15 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC19.94■□□□□ 0.78
MSGN1A6NI15 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
MSGN1A6NI15 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
MSGN1A6NI15 AC022211.4-201ENST00000625094 2161 ntBASIC19.94■□□□□ 0.78
MSGN1A6NI15 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.94■□□□□ 0.78
MSGN1A6NI15 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
MSGN1A6NI15 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.93■□□□□ 0.78
MSGN1A6NI15 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MSGN1A6NI15 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MSGN1A6NI15 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MSGN1A6NI15 CHML-204ENST00000638121 920 ntTSL 2 BASIC19.93■□□□□ 0.78
MSGN1A6NI15 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
MSGN1A6NI15 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
MSGN1A6NI15 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
MSGN1A6NI15 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
MSGN1A6NI15 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC19.92■□□□□ 0.78
MSGN1A6NI15 PEX7-203ENST00000541292 945 ntTSL 5 BASIC19.92■□□□□ 0.78
MSGN1A6NI15 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC19.92■□□□□ 0.78
MSGN1A6NI15 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MSGN1A6NI15 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MSGN1A6NI15 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
MSGN1A6NI15 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.92■□□□□ 0.78
MSGN1A6NI15 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC19.92■□□□□ 0.78
MSGN1A6NI15 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.91■□□□□ 0.78
MSGN1A6NI15 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.91■□□□□ 0.78
MSGN1A6NI15 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MSGN1A6NI15 AC142472.1-201ENST00000612013 1741 ntBASIC19.9■□□□□ 0.78
MSGN1A6NI15 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
MSGN1A6NI15 ABHD17AP4-201ENST00000411545 909 ntBASIC19.9■□□□□ 0.78
MSGN1A6NI15 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC19.9■□□□□ 0.78
MSGN1A6NI15 AC010501.1-201ENST00000606270 1962 ntBASIC19.9■□□□□ 0.78
MSGN1A6NI15 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC19.89■□□□□ 0.77
MSGN1A6NI15 DUX4L11-201ENST00000611504 1267 ntBASIC19.89■□□□□ 0.77
MSGN1A6NI15 DUX4L12-201ENST00000614593 1267 ntBASIC19.89■□□□□ 0.77
MSGN1A6NI15 DUX4L14-201ENST00000621227 1267 ntBASIC19.89■□□□□ 0.77
MSGN1A6NI15 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MSGN1A6NI15 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MSGN1A6NI15 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MSGN1A6NI15 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MSGN1A6NI15 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MSGN1A6NI15 DUX4L13-201ENST00000554103 1267 ntBASIC19.88■□□□□ 0.77
MSGN1A6NI15 DUX4L15-201ENST00000611059 1267 ntBASIC19.88■□□□□ 0.77
MSGN1A6NI15 DUX4L23-201ENST00000615195 1269 ntBASIC19.88■□□□□ 0.77
MSGN1A6NI15 DUX4L24-201ENST00000617576 1269 ntBASIC19.88■□□□□ 0.77
MSGN1A6NI15 DUX4L22-201ENST00000618238 1269 ntBASIC19.88■□□□□ 0.77
MSGN1A6NI15 DUX4L20-201ENST00000619712 1269 ntBASIC19.88■□□□□ 0.77
MSGN1A6NI15 DUX4L21-201ENST00000622058 1269 ntBASIC19.88■□□□□ 0.77
MSGN1A6NI15 DUX4L10-201ENST00000622460 1267 ntBASIC19.88■□□□□ 0.77
MSGN1A6NI15 DUX4L25-201ENST00000624915 1269 ntBASIC19.88■□□□□ 0.77
MSGN1A6NI15 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MSGN1A6NI15 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MSGN1A6NI15 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MSGN1A6NI15 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MSGN1A6NI15 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MSGN1A6NI15 AC068473.5-201ENST00000616428 2072 ntBASIC19.87■□□□□ 0.77
MSGN1A6NI15 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MSGN1A6NI15 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MSGN1A6NI15 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MSGN1A6NI15 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
MSGN1A6NI15 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MSGN1A6NI15 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MSGN1A6NI15 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MSGN1A6NI15 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MSGN1A6NI15 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
MSGN1A6NI15 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
MSGN1A6NI15 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MSGN1A6NI15 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MSGN1A6NI15 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
MSGN1A6NI15 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
MSGN1A6NI15 CHST11-202ENST00000546689 756 ntTSL 2 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms