Protein–RNA interactions for Protein: A0A0B4J264

TRAV38-1, T-cell receptor alpha variable 38-1 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV38-1A0A0B4J264 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRAV38-1A0A0B4J264 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.35■□□□□ 0.85
TRAV38-1A0A0B4J264 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRAV38-1A0A0B4J264 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
TRAV38-1A0A0B4J264 AC009831.1-201ENST00000580420 1582 ntBASIC20.34■□□□□ 0.85
TRAV38-1A0A0B4J264 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
TRAV38-1A0A0B4J264 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV38-1A0A0B4J264 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
TRAV38-1A0A0B4J264 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV38-1A0A0B4J264 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.34■□□□□ 0.85
TRAV38-1A0A0B4J264 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV38-1A0A0B4J264 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.34■□□□□ 0.85
TRAV38-1A0A0B4J264 RAP2CP1-202ENST00000605179 643 ntBASIC20.34■□□□□ 0.85
TRAV38-1A0A0B4J264 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.34■□□□□ 0.85
TRAV38-1A0A0B4J264 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.33■□□□□ 0.85
TRAV38-1A0A0B4J264 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TRAV38-1A0A0B4J264 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRAV38-1A0A0B4J264 NTF6A-201ENST00000591175 560 ntBASIC20.33■□□□□ 0.85
TRAV38-1A0A0B4J264 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRAV38-1A0A0B4J264 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV38-1A0A0B4J264 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV38-1A0A0B4J264 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV38-1A0A0B4J264 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.32■□□□□ 0.84
TRAV38-1A0A0B4J264 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV38-1A0A0B4J264 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV38-1A0A0B4J264 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV38-1A0A0B4J264 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRAV38-1A0A0B4J264 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRAV38-1A0A0B4J264 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRAV38-1A0A0B4J264 U85056.1-201ENST00000616429 682 ntBASIC20.31■□□□□ 0.84
TRAV38-1A0A0B4J264 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRAV38-1A0A0B4J264 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.31■□□□□ 0.84
TRAV38-1A0A0B4J264 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
TRAV38-1A0A0B4J264 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRAV38-1A0A0B4J264 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.31■□□□□ 0.84
TRAV38-1A0A0B4J264 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.31■□□□□ 0.84
TRAV38-1A0A0B4J264 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRAV38-1A0A0B4J264 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRAV38-1A0A0B4J264 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.3■□□□□ 0.84
TRAV38-1A0A0B4J264 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRAV38-1A0A0B4J264 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRAV38-1A0A0B4J264 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
TRAV38-1A0A0B4J264 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.3■□□□□ 0.84
TRAV38-1A0A0B4J264 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRAV38-1A0A0B4J264 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.3■□□□□ 0.84
TRAV38-1A0A0B4J264 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRAV38-1A0A0B4J264 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.29■□□□□ 0.84
TRAV38-1A0A0B4J264 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRAV38-1A0A0B4J264 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRAV38-1A0A0B4J264 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRAV38-1A0A0B4J264 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRAV38-1A0A0B4J264 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.28■□□□□ 0.84
TRAV38-1A0A0B4J264 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV38-1A0A0B4J264 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV38-1A0A0B4J264 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
TRAV38-1A0A0B4J264 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAV38-1A0A0B4J264 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAV38-1A0A0B4J264 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAV38-1A0A0B4J264 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRAV38-1A0A0B4J264 AL592293.1-201ENST00000502889 1188 ntBASIC20.27■□□□□ 0.84
TRAV38-1A0A0B4J264 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.27■□□□□ 0.84
TRAV38-1A0A0B4J264 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRAV38-1A0A0B4J264 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.27■□□□□ 0.84
TRAV38-1A0A0B4J264 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
TRAV38-1A0A0B4J264 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.26■□□□□ 0.83
TRAV38-1A0A0B4J264 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV38-1A0A0B4J264 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TRAV38-1A0A0B4J264 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV38-1A0A0B4J264 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV38-1A0A0B4J264 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
TRAV38-1A0A0B4J264 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV38-1A0A0B4J264 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV38-1A0A0B4J264 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV38-1A0A0B4J264 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV38-1A0A0B4J264 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV38-1A0A0B4J264 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV38-1A0A0B4J264 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV38-1A0A0B4J264 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV38-1A0A0B4J264 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV38-1A0A0B4J264 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.24■□□□□ 0.83
TRAV38-1A0A0B4J264 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.24■□□□□ 0.83
TRAV38-1A0A0B4J264 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV38-1A0A0B4J264 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV38-1A0A0B4J264 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
TRAV38-1A0A0B4J264 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAV38-1A0A0B4J264 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRAV38-1A0A0B4J264 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRAV38-1A0A0B4J264 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.23■□□□□ 0.83
TRAV38-1A0A0B4J264 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
TRAV38-1A0A0B4J264 KRT18P60-201ENST00000312876 1297 ntBASIC20.22■□□□□ 0.83
TRAV38-1A0A0B4J264 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.22■□□□□ 0.83
TRAV38-1A0A0B4J264 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAV38-1A0A0B4J264 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRAV38-1A0A0B4J264 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.22■□□□□ 0.83
TRAV38-1A0A0B4J264 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRAV38-1A0A0B4J264 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRAV38-1A0A0B4J264 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAV38-1A0A0B4J264 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAV38-1A0A0B4J264 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.21■□□□□ 0.83
TRAV38-1A0A0B4J264 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms