Protein–RNA interactions for Protein: Q9Y5F1

PCDHB12, Protocadherin beta-12, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB12Q9Y5F1 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
PCDHB12Q9Y5F1 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
PCDHB12Q9Y5F1 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
PCDHB12Q9Y5F1 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
PCDHB12Q9Y5F1 OR2A1-AS1-204ENST00000470435 602 ntBASIC26.36■■□□□ 1.81
PCDHB12Q9Y5F1 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC26.36■■□□□ 1.81
PCDHB12Q9Y5F1 AC131212.1-201ENST00000613771 668 ntBASIC26.36■■□□□ 1.81
PCDHB12Q9Y5F1 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
PCDHB12Q9Y5F1 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
PCDHB12Q9Y5F1 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
PCDHB12Q9Y5F1 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PCDHB12Q9Y5F1 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC26.35■■□□□ 1.81
PCDHB12Q9Y5F1 GUSBP5-201ENST00000418136 578 ntBASIC26.35■■□□□ 1.81
PCDHB12Q9Y5F1 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
PCDHB12Q9Y5F1 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC26.35■■□□□ 1.81
PCDHB12Q9Y5F1 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC26.35■■□□□ 1.81
PCDHB12Q9Y5F1 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PCDHB12Q9Y5F1 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
PCDHB12Q9Y5F1 AL031848.2-201ENST00000607670 837 ntBASIC26.35■■□□□ 1.81
PCDHB12Q9Y5F1 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC26.35■■□□□ 1.81
PCDHB12Q9Y5F1 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC26.34■■□□□ 1.81
PCDHB12Q9Y5F1 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC26.34■■□□□ 1.81
PCDHB12Q9Y5F1 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC26.34■■□□□ 1.81
PCDHB12Q9Y5F1 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC26.34■■□□□ 1.81
PCDHB12Q9Y5F1 AC103724.3-201ENST00000564481 992 ntBASIC26.34■■□□□ 1.81
PCDHB12Q9Y5F1 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PCDHB12Q9Y5F1 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
PCDHB12Q9Y5F1 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
PCDHB12Q9Y5F1 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC26.33■■□□□ 1.81
PCDHB12Q9Y5F1 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PCDHB12Q9Y5F1 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
PCDHB12Q9Y5F1 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC26.33■■□□□ 1.8
PCDHB12Q9Y5F1 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
PCDHB12Q9Y5F1 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHB12Q9Y5F1 PRTG-204ENST00000561292 833 ntTSL 3 BASIC26.32■■□□□ 1.8
PCDHB12Q9Y5F1 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHB12Q9Y5F1 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
PCDHB12Q9Y5F1 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
PCDHB12Q9Y5F1 AC019171.1-201ENST00000601251 1056 ntBASIC26.31■■□□□ 1.8
PCDHB12Q9Y5F1 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
PCDHB12Q9Y5F1 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHB12Q9Y5F1 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
PCDHB12Q9Y5F1 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHB12Q9Y5F1 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
PCDHB12Q9Y5F1 THA1P-201ENST00000590384 1145 ntBASIC26.29■■□□□ 1.8
PCDHB12Q9Y5F1 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC26.29■■□□□ 1.8
PCDHB12Q9Y5F1 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
PCDHB12Q9Y5F1 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
PCDHB12Q9Y5F1 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
PCDHB12Q9Y5F1 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
PCDHB12Q9Y5F1 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
PCDHB12Q9Y5F1 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PCDHB12Q9Y5F1 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
PCDHB12Q9Y5F1 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC26.27■■□□□ 1.8
PCDHB12Q9Y5F1 AC087393.1-201ENST00000582896 145 ntBASIC26.27■■□□□ 1.8
PCDHB12Q9Y5F1 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
PCDHB12Q9Y5F1 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC26.27■■□□□ 1.8
PCDHB12Q9Y5F1 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PCDHB12Q9Y5F1 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PCDHB12Q9Y5F1 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHB12Q9Y5F1 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHB12Q9Y5F1 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHB12Q9Y5F1 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
PCDHB12Q9Y5F1 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHB12Q9Y5F1 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
PCDHB12Q9Y5F1 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.25■■□□□ 1.79
PCDHB12Q9Y5F1 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHB12Q9Y5F1 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.24■■□□□ 1.79
PCDHB12Q9Y5F1 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PCDHB12Q9Y5F1 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
PCDHB12Q9Y5F1 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
PCDHB12Q9Y5F1 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PCDHB12Q9Y5F1 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PCDHB12Q9Y5F1 MTURN-203ENST00000409688 843 ntTSL 2 BASIC26.24■■□□□ 1.79
PCDHB12Q9Y5F1 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PCDHB12Q9Y5F1 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PCDHB12Q9Y5F1 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHB12Q9Y5F1 RNF146-205ENST00000477776 762 ntTSL 3 BASIC26.22■■□□□ 1.79
PCDHB12Q9Y5F1 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
PCDHB12Q9Y5F1 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
PCDHB12Q9Y5F1 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC26.21■■□□□ 1.79
PCDHB12Q9Y5F1 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC26.21■■□□□ 1.79
PCDHB12Q9Y5F1 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
PCDHB12Q9Y5F1 RPS2P7-201ENST00000447334 885 ntBASIC26.21■■□□□ 1.79
PCDHB12Q9Y5F1 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC26.21■■□□□ 1.79
PCDHB12Q9Y5F1 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC26.21■■□□□ 1.79
PCDHB12Q9Y5F1 PROC-203ENST00000409048 1586 ntTSL 5 BASIC26.2■■□□□ 1.79
PCDHB12Q9Y5F1 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC26.2■■□□□ 1.79
PCDHB12Q9Y5F1 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
PCDHB12Q9Y5F1 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
PCDHB12Q9Y5F1 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC26.2■■□□□ 1.78
PCDHB12Q9Y5F1 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.2■■□□□ 1.78
PCDHB12Q9Y5F1 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC26.19■■□□□ 1.78
PCDHB12Q9Y5F1 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC26.19■■□□□ 1.78
PCDHB12Q9Y5F1 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PCDHB12Q9Y5F1 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC26.18■■□□□ 1.78
PCDHB12Q9Y5F1 AL356441.2-201ENST00000443009 864 ntBASIC26.18■■□□□ 1.78
PCDHB12Q9Y5F1 AC239859.2-201ENST00000444165 318 ntBASIC26.18■■□□□ 1.78
PCDHB12Q9Y5F1 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC26.18■■□□□ 1.78
PCDHB12Q9Y5F1 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms