Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
RCL1Q9Y2P8 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RCL1Q9Y2P8 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RCL1Q9Y2P8 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
RCL1Q9Y2P8 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RCL1Q9Y2P8 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RCL1Q9Y2P8 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
RCL1Q9Y2P8 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.8■□□□□ 0.76
RCL1Q9Y2P8 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.8■□□□□ 0.76
RCL1Q9Y2P8 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RCL1Q9Y2P8 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.8■□□□□ 0.76
RCL1Q9Y2P8 AC022211.4-201ENST00000625094 2161 ntBASIC19.8■□□□□ 0.76
RCL1Q9Y2P8 WHAMMP3-201ENST00000611636 1609 ntBASIC19.8■□□□□ 0.76
RCL1Q9Y2P8 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC19.79■□□□□ 0.76
RCL1Q9Y2P8 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC19.79■□□□□ 0.76
RCL1Q9Y2P8 AC136428.2-201ENST00000563187 214 ntBASIC19.79■□□□□ 0.76
RCL1Q9Y2P8 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RCL1Q9Y2P8 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RCL1Q9Y2P8 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RCL1Q9Y2P8 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
RCL1Q9Y2P8 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.79■□□□□ 0.76
RCL1Q9Y2P8 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RCL1Q9Y2P8 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RCL1Q9Y2P8 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RCL1Q9Y2P8 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
RCL1Q9Y2P8 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RCL1Q9Y2P8 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RCL1Q9Y2P8 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RCL1Q9Y2P8 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
RCL1Q9Y2P8 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC19.77■□□□□ 0.76
RCL1Q9Y2P8 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RCL1Q9Y2P8 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RCL1Q9Y2P8 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RCL1Q9Y2P8 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RCL1Q9Y2P8 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
RCL1Q9Y2P8 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RCL1Q9Y2P8 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RCL1Q9Y2P8 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
RCL1Q9Y2P8 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RCL1Q9Y2P8 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RCL1Q9Y2P8 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
RCL1Q9Y2P8 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RCL1Q9Y2P8 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RCL1Q9Y2P8 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RCL1Q9Y2P8 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RCL1Q9Y2P8 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RCL1Q9Y2P8 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RCL1Q9Y2P8 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC19.74■□□□□ 0.75
RCL1Q9Y2P8 AC108673.1-201ENST00000510422 1159 ntBASIC19.74■□□□□ 0.75
RCL1Q9Y2P8 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.74■□□□□ 0.75
RCL1Q9Y2P8 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RCL1Q9Y2P8 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RCL1Q9Y2P8 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
RCL1Q9Y2P8 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.73■□□□□ 0.75
RCL1Q9Y2P8 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RCL1Q9Y2P8 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
RCL1Q9Y2P8 CHML-205ENST00000638160 705 ntTSL 3 BASIC19.73■□□□□ 0.75
RCL1Q9Y2P8 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RCL1Q9Y2P8 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RCL1Q9Y2P8 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RCL1Q9Y2P8 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC19.73■□□□□ 0.75
RCL1Q9Y2P8 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RCL1Q9Y2P8 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RCL1Q9Y2P8 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.72■□□□□ 0.75
RCL1Q9Y2P8 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC19.72■□□□□ 0.75
RCL1Q9Y2P8 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RCL1Q9Y2P8 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC19.72■□□□□ 0.75
RCL1Q9Y2P8 MIR6090-201ENST00000622481 60 ntBASIC19.72■□□□□ 0.75
RCL1Q9Y2P8 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC19.72■□□□□ 0.75
RCL1Q9Y2P8 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RCL1Q9Y2P8 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RCL1Q9Y2P8 AC133561.1-201ENST00000568600 2415 ntBASIC19.71■□□□□ 0.75
RCL1Q9Y2P8 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.74
RCL1Q9Y2P8 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19.7■□□□□ 0.74
RCL1Q9Y2P8 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
RCL1Q9Y2P8 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RCL1Q9Y2P8 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.7■□□□□ 0.74
RCL1Q9Y2P8 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
RCL1Q9Y2P8 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RCL1Q9Y2P8 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.7■□□□□ 0.74
RCL1Q9Y2P8 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
RCL1Q9Y2P8 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RCL1Q9Y2P8 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RCL1Q9Y2P8 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RCL1Q9Y2P8 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.69■□□□□ 0.74
RCL1Q9Y2P8 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RCL1Q9Y2P8 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RCL1Q9Y2P8 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.68■□□□□ 0.74
RCL1Q9Y2P8 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.68■□□□□ 0.74
RCL1Q9Y2P8 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RCL1Q9Y2P8 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RCL1Q9Y2P8 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC19.68■□□□□ 0.74
RCL1Q9Y2P8 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RCL1Q9Y2P8 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RCL1Q9Y2P8 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
RCL1Q9Y2P8 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.68■□□□□ 0.74
RCL1Q9Y2P8 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
RCL1Q9Y2P8 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RCL1Q9Y2P8 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RCL1Q9Y2P8 PEX7-203ENST00000541292 945 ntTSL 5 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms