Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CYSTM1Q9H1C7 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CYSTM1Q9H1C7 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CYSTM1Q9H1C7 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CYSTM1Q9H1C7 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CYSTM1Q9H1C7 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CYSTM1Q9H1C7 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CYSTM1Q9H1C7 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CYSTM1Q9H1C7 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CYSTM1Q9H1C7 AC007375.3-201ENST00000600936 2314 ntBASIC14.48□□□□□ -0.09
CYSTM1Q9H1C7 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CYSTM1Q9H1C7 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CYSTM1Q9H1C7 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CYSTM1Q9H1C7 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CYSTM1Q9H1C7 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
CYSTM1Q9H1C7 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
CYSTM1Q9H1C7 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC14.47□□□□□ -0.09
CYSTM1Q9H1C7 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CYSTM1Q9H1C7 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CYSTM1Q9H1C7 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CYSTM1Q9H1C7 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CYSTM1Q9H1C7 LINC01003-201ENST00000564834 1764 ntBASIC14.47□□□□□ -0.09
CYSTM1Q9H1C7 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CYSTM1Q9H1C7 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CYSTM1Q9H1C7 AF106564.1-201ENST00000607058 2553 ntBASIC14.46□□□□□ -0.09
CYSTM1Q9H1C7 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
CYSTM1Q9H1C7 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CYSTM1Q9H1C7 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CYSTM1Q9H1C7 EP400NL-214ENST00000641289 2402 ntBASIC14.46□□□□□ -0.09
CYSTM1Q9H1C7 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CYSTM1Q9H1C7 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CYSTM1Q9H1C7 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CYSTM1Q9H1C7 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
CYSTM1Q9H1C7 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CYSTM1Q9H1C7 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
CYSTM1Q9H1C7 AL117328.2-201ENST00000624617 1940 ntBASIC14.45□□□□□ -0.1
CYSTM1Q9H1C7 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CYSTM1Q9H1C7 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CYSTM1Q9H1C7 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CYSTM1Q9H1C7 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CYSTM1Q9H1C7 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC14.45□□□□□ -0.1
CYSTM1Q9H1C7 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CYSTM1Q9H1C7 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CYSTM1Q9H1C7 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CYSTM1Q9H1C7 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC14.44□□□□□ -0.1
CYSTM1Q9H1C7 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CYSTM1Q9H1C7 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC14.44□□□□□ -0.1
CYSTM1Q9H1C7 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC14.44□□□□□ -0.1
CYSTM1Q9H1C7 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CYSTM1Q9H1C7 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
CYSTM1Q9H1C7 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CYSTM1Q9H1C7 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
CYSTM1Q9H1C7 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
CYSTM1Q9H1C7 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CYSTM1Q9H1C7 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CYSTM1Q9H1C7 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CYSTM1Q9H1C7 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CYSTM1Q9H1C7 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC14.43□□□□□ -0.1
CYSTM1Q9H1C7 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC14.43□□□□□ -0.1
CYSTM1Q9H1C7 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CYSTM1Q9H1C7 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CYSTM1Q9H1C7 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CYSTM1Q9H1C7 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CYSTM1Q9H1C7 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CYSTM1Q9H1C7 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CYSTM1Q9H1C7 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC14.42□□□□□ -0.1
CYSTM1Q9H1C7 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CYSTM1Q9H1C7 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
CYSTM1Q9H1C7 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CYSTM1Q9H1C7 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CYSTM1Q9H1C7 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CYSTM1Q9H1C7 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CYSTM1Q9H1C7 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CYSTM1Q9H1C7 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CYSTM1Q9H1C7 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CYSTM1Q9H1C7 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CYSTM1Q9H1C7 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CYSTM1Q9H1C7 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CYSTM1Q9H1C7 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CYSTM1Q9H1C7 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CYSTM1Q9H1C7 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CYSTM1Q9H1C7 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CYSTM1Q9H1C7 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CYSTM1Q9H1C7 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CYSTM1Q9H1C7 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CYSTM1Q9H1C7 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CYSTM1Q9H1C7 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC14.38□□□□□ -0.11
CYSTM1Q9H1C7 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
CYSTM1Q9H1C7 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CYSTM1Q9H1C7 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CYSTM1Q9H1C7 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CYSTM1Q9H1C7 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CYSTM1Q9H1C7 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CYSTM1Q9H1C7 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CYSTM1Q9H1C7 DUSP8P5-201ENST00000422884 1815 ntBASIC14.37□□□□□ -0.11
CYSTM1Q9H1C7 AC073130.3-201ENST00000624389 2278 ntBASIC14.37□□□□□ -0.11
CYSTM1Q9H1C7 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CYSTM1Q9H1C7 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CYSTM1Q9H1C7 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CYSTM1Q9H1C7 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms