Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC18.24■□□□□ 0.51
AP1S3Q96PC3 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.24■□□□□ 0.51
AP1S3Q96PC3 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP1S3Q96PC3 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP1S3Q96PC3 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC18.24■□□□□ 0.51
AP1S3Q96PC3 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
AP1S3Q96PC3 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC18.23■□□□□ 0.51
AP1S3Q96PC3 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
AP1S3Q96PC3 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
AP1S3Q96PC3 RPS2-209ENST00000529806 993 ntTSL 3 BASIC18.22■□□□□ 0.51
AP1S3Q96PC3 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
AP1S3Q96PC3 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.22■□□□□ 0.51
AP1S3Q96PC3 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
AP1S3Q96PC3 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
AP1S3Q96PC3 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC18.21■□□□□ 0.51
AP1S3Q96PC3 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
AP1S3Q96PC3 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
AP1S3Q96PC3 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
AP1S3Q96PC3 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC18.21■□□□□ 0.5
AP1S3Q96PC3 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC18.2■□□□□ 0.5
AP1S3Q96PC3 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP1S3Q96PC3 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
AP1S3Q96PC3 AC091060.1-201ENST00000623524 1766 ntBASIC18.19■□□□□ 0.5
AP1S3Q96PC3 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP1S3Q96PC3 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
AP1S3Q96PC3 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP1S3Q96PC3 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP1S3Q96PC3 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP1S3Q96PC3 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP1S3Q96PC3 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP1S3Q96PC3 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
AP1S3Q96PC3 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
AP1S3Q96PC3 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC18.19■□□□□ 0.5
AP1S3Q96PC3 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC18.19■□□□□ 0.5
AP1S3Q96PC3 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
AP1S3Q96PC3 CAHM-201ENST00000604200 896 ntBASIC18.18■□□□□ 0.5
AP1S3Q96PC3 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
AP1S3Q96PC3 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC18.18■□□□□ 0.5
AP1S3Q96PC3 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
AP1S3Q96PC3 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP1S3Q96PC3 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
AP1S3Q96PC3 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
AP1S3Q96PC3 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC18.17■□□□□ 0.5
AP1S3Q96PC3 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP1S3Q96PC3 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP1S3Q96PC3 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC18.17■□□□□ 0.5
AP1S3Q96PC3 AC145676.1-201ENST00000514988 2004 ntBASIC18.16■□□□□ 0.5
AP1S3Q96PC3 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
AP1S3Q96PC3 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
AP1S3Q96PC3 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP1S3Q96PC3 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.16■□□□□ 0.5
AP1S3Q96PC3 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
AP1S3Q96PC3 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
AP1S3Q96PC3 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
AP1S3Q96PC3 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP1S3Q96PC3 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
AP1S3Q96PC3 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC18.15■□□□□ 0.5
AP1S3Q96PC3 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP1S3Q96PC3 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC18.15■□□□□ 0.5
AP1S3Q96PC3 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP1S3Q96PC3 AC135983.2-203ENST00000454486 1613 ntBASIC18.15■□□□□ 0.5
AP1S3Q96PC3 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP1S3Q96PC3 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
AP1S3Q96PC3 AC093323.1-202ENST00000635031 2045 ntBASIC18.14■□□□□ 0.49
AP1S3Q96PC3 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC18.14■□□□□ 0.49
AP1S3Q96PC3 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.13■□□□□ 0.49
AP1S3Q96PC3 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
AP1S3Q96PC3 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC18.13■□□□□ 0.49
AP1S3Q96PC3 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
AP1S3Q96PC3 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP1S3Q96PC3 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
AP1S3Q96PC3 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP1S3Q96PC3 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
AP1S3Q96PC3 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.12■□□□□ 0.49
AP1S3Q96PC3 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP1S3Q96PC3 MIR762-201ENST00000390236 83 ntBASIC18.12■□□□□ 0.49
AP1S3Q96PC3 AC136428.2-201ENST00000563187 214 ntBASIC18.12■□□□□ 0.49
AP1S3Q96PC3 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC18.12■□□□□ 0.49
AP1S3Q96PC3 AC097358.2-201ENST00000607541 1159 ntBASIC18.12■□□□□ 0.49
AP1S3Q96PC3 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC18.12■□□□□ 0.49
AP1S3Q96PC3 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP1S3Q96PC3 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
AP1S3Q96PC3 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP1S3Q96PC3 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.12■□□□□ 0.49
AP1S3Q96PC3 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
AP1S3Q96PC3 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
AP1S3Q96PC3 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
AP1S3Q96PC3 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
AP1S3Q96PC3 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
AP1S3Q96PC3 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
AP1S3Q96PC3 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC18.11■□□□□ 0.49
AP1S3Q96PC3 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP1S3Q96PC3 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
AP1S3Q96PC3 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
AP1S3Q96PC3 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC18.1■□□□□ 0.49
AP1S3Q96PC3 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP1S3Q96PC3 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP1S3Q96PC3 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
AP1S3Q96PC3 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP1S3Q96PC3 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 145.4 ms