Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF48Q96MX3 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF48Q96MX3 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
ZNF48Q96MX3 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
ZNF48Q96MX3 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ZNF48Q96MX3 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.83■□□□□ 0.77
ZNF48Q96MX3 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ZNF48Q96MX3 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
ZNF48Q96MX3 KRT8P33-201ENST00000508125 1423 ntBASIC19.83■□□□□ 0.76
ZNF48Q96MX3 WHAMMP3-201ENST00000611636 1609 ntBASIC19.83■□□□□ 0.76
ZNF48Q96MX3 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
ZNF48Q96MX3 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
ZNF48Q96MX3 LINC01003-201ENST00000564834 1764 ntBASIC19.83■□□□□ 0.76
ZNF48Q96MX3 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ZNF48Q96MX3 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZNF48Q96MX3 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC19.82■□□□□ 0.76
ZNF48Q96MX3 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.82■□□□□ 0.76
ZNF48Q96MX3 AL035685.1-201ENST00000636663 812 ntBASIC19.82■□□□□ 0.76
ZNF48Q96MX3 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.82■□□□□ 0.76
ZNF48Q96MX3 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZNF48Q96MX3 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.82■□□□□ 0.76
ZNF48Q96MX3 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZNF48Q96MX3 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC19.82■□□□□ 0.76
ZNF48Q96MX3 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ZNF48Q96MX3 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZNF48Q96MX3 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZNF48Q96MX3 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.81■□□□□ 0.76
ZNF48Q96MX3 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ZNF48Q96MX3 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZNF48Q96MX3 AC139795.1-202ENST00000500444 432 ntBASIC19.81■□□□□ 0.76
ZNF48Q96MX3 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
ZNF48Q96MX3 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.8■□□□□ 0.76
ZNF48Q96MX3 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.8■□□□□ 0.76
ZNF48Q96MX3 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.8■□□□□ 0.76
ZNF48Q96MX3 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.8■□□□□ 0.76
ZNF48Q96MX3 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF48Q96MX3 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF48Q96MX3 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.8■□□□□ 0.76
ZNF48Q96MX3 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.8■□□□□ 0.76
ZNF48Q96MX3 AC018755.3-202ENST00000596210 929 ntBASIC19.8■□□□□ 0.76
ZNF48Q96MX3 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.8■□□□□ 0.76
ZNF48Q96MX3 AC074183.2-201ENST00000623112 922 ntBASIC19.8■□□□□ 0.76
ZNF48Q96MX3 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.8■□□□□ 0.76
ZNF48Q96MX3 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF48Q96MX3 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF48Q96MX3 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF48Q96MX3 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.79■□□□□ 0.76
ZNF48Q96MX3 PVT1_1.1-201ENST00000615125 194 ntBASIC19.79■□□□□ 0.76
ZNF48Q96MX3 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF48Q96MX3 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF48Q96MX3 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZNF48Q96MX3 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZNF48Q96MX3 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZNF48Q96MX3 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
ZNF48Q96MX3 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19.78■□□□□ 0.76
ZNF48Q96MX3 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC19.77■□□□□ 0.76
ZNF48Q96MX3 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
ZNF48Q96MX3 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF48Q96MX3 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.77■□□□□ 0.76
ZNF48Q96MX3 AC103834.1-201ENST00000520383 144 ntBASIC19.77■□□□□ 0.76
ZNF48Q96MX3 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF48Q96MX3 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF48Q96MX3 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
ZNF48Q96MX3 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF48Q96MX3 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
ZNF48Q96MX3 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.76■□□□□ 0.75
ZNF48Q96MX3 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF48Q96MX3 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF48Q96MX3 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.76■□□□□ 0.75
ZNF48Q96MX3 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF48Q96MX3 AL121749.1-202ENST00000609313 2153 ntBASIC19.76■□□□□ 0.75
ZNF48Q96MX3 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF48Q96MX3 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
ZNF48Q96MX3 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF48Q96MX3 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF48Q96MX3 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.75■□□□□ 0.75
ZNF48Q96MX3 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF48Q96MX3 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF48Q96MX3 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF48Q96MX3 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC19.75■□□□□ 0.75
ZNF48Q96MX3 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF48Q96MX3 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF48Q96MX3 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.74■□□□□ 0.75
ZNF48Q96MX3 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.74■□□□□ 0.75
ZNF48Q96MX3 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
ZNF48Q96MX3 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF48Q96MX3 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF48Q96MX3 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.73■□□□□ 0.75
ZNF48Q96MX3 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF48Q96MX3 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF48Q96MX3 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
ZNF48Q96MX3 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF48Q96MX3 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.72■□□□□ 0.75
ZNF48Q96MX3 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.72■□□□□ 0.75
ZNF48Q96MX3 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF48Q96MX3 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF48Q96MX3 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
ZNF48Q96MX3 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF48Q96MX3 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF48Q96MX3 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 311.6 ms