Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC26.85■■□□□ 1.89
TMEM40Q8WWA1 AL451085.2-201ENST00000605085 799 ntBASIC26.85■■□□□ 1.89
TMEM40Q8WWA1 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
TMEM40Q8WWA1 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC26.85■■□□□ 1.89
TMEM40Q8WWA1 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC26.85■■□□□ 1.89
TMEM40Q8WWA1 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC26.84■■□□□ 1.89
TMEM40Q8WWA1 KRT8P33-201ENST00000508125 1423 ntBASIC26.84■■□□□ 1.89
TMEM40Q8WWA1 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
TMEM40Q8WWA1 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC26.84■■□□□ 1.89
TMEM40Q8WWA1 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
TMEM40Q8WWA1 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC26.83■■□□□ 1.89
TMEM40Q8WWA1 IDNK-203ENST00000405990 629 ntTSL 2 BASIC26.83■■□□□ 1.89
TMEM40Q8WWA1 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC26.83■■□□□ 1.89
TMEM40Q8WWA1 AC139795.1-202ENST00000500444 432 ntBASIC26.83■■□□□ 1.89
TMEM40Q8WWA1 AC074183.2-201ENST00000623112 922 ntBASIC26.83■■□□□ 1.89
TMEM40Q8WWA1 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
TMEM40Q8WWA1 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
TMEM40Q8WWA1 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC26.82■■□□□ 1.88
TMEM40Q8WWA1 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC26.82■■□□□ 1.88
TMEM40Q8WWA1 AC103834.1-201ENST00000520383 144 ntBASIC26.82■■□□□ 1.88
TMEM40Q8WWA1 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC26.82■■□□□ 1.88
TMEM40Q8WWA1 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC26.82■■□□□ 1.88
TMEM40Q8WWA1 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
TMEM40Q8WWA1 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC26.81■■□□□ 1.88
TMEM40Q8WWA1 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
TMEM40Q8WWA1 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC26.81■■□□□ 1.88
TMEM40Q8WWA1 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC26.81■■□□□ 1.88
TMEM40Q8WWA1 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
TMEM40Q8WWA1 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
TMEM40Q8WWA1 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
TMEM40Q8WWA1 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
TMEM40Q8WWA1 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
TMEM40Q8WWA1 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC26.8■■□□□ 1.88
TMEM40Q8WWA1 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
TMEM40Q8WWA1 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC26.8■■□□□ 1.88
TMEM40Q8WWA1 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC26.8■■□□□ 1.88
TMEM40Q8WWA1 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
TMEM40Q8WWA1 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
TMEM40Q8WWA1 AL035685.1-201ENST00000636663 812 ntBASIC26.78■■□□□ 1.88
TMEM40Q8WWA1 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
TMEM40Q8WWA1 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
TMEM40Q8WWA1 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
TMEM40Q8WWA1 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
TMEM40Q8WWA1 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
TMEM40Q8WWA1 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
TMEM40Q8WWA1 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC26.76■■□□□ 1.88
TMEM40Q8WWA1 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
TMEM40Q8WWA1 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC26.76■■□□□ 1.87
TMEM40Q8WWA1 HYI-210ENST00000486909 905 ntTSL 5 BASIC26.76■■□□□ 1.87
TMEM40Q8WWA1 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC26.76■■□□□ 1.87
TMEM40Q8WWA1 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
TMEM40Q8WWA1 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
TMEM40Q8WWA1 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
TMEM40Q8WWA1 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
TMEM40Q8WWA1 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC26.75■■□□□ 1.87
TMEM40Q8WWA1 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
TMEM40Q8WWA1 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC26.75■■□□□ 1.87
TMEM40Q8WWA1 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
TMEM40Q8WWA1 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
TMEM40Q8WWA1 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC26.74■■□□□ 1.87
TMEM40Q8WWA1 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
TMEM40Q8WWA1 BX255925.1-201ENST00000566954 1854 ntBASIC26.74■■□□□ 1.87
TMEM40Q8WWA1 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC26.74■■□□□ 1.87
TMEM40Q8WWA1 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
TMEM40Q8WWA1 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC26.73■■□□□ 1.87
TMEM40Q8WWA1 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
TMEM40Q8WWA1 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
TMEM40Q8WWA1 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC26.73■■□□□ 1.87
TMEM40Q8WWA1 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
TMEM40Q8WWA1 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
TMEM40Q8WWA1 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
TMEM40Q8WWA1 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
TMEM40Q8WWA1 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
TMEM40Q8WWA1 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC26.72■■□□□ 1.87
TMEM40Q8WWA1 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC26.72■■□□□ 1.87
TMEM40Q8WWA1 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
TMEM40Q8WWA1 IDNK-201ENST00000376417 511 ntTSL 5 BASIC26.71■■□□□ 1.87
TMEM40Q8WWA1 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
TMEM40Q8WWA1 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
TMEM40Q8WWA1 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC26.71■■□□□ 1.87
TMEM40Q8WWA1 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.71■■□□□ 1.87
TMEM40Q8WWA1 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
TMEM40Q8WWA1 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
TMEM40Q8WWA1 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
TMEM40Q8WWA1 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
TMEM40Q8WWA1 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
TMEM40Q8WWA1 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
TMEM40Q8WWA1 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
TMEM40Q8WWA1 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC26.69■■□□□ 1.86
TMEM40Q8WWA1 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC26.69■■□□□ 1.86
TMEM40Q8WWA1 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.68■■□□□ 1.86
TMEM40Q8WWA1 MIR4508-201ENST00000584178 70 ntBASIC26.68■■□□□ 1.86
TMEM40Q8WWA1 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC26.68■■□□□ 1.86
TMEM40Q8WWA1 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
TMEM40Q8WWA1 YBX1P4-201ENST00000392794 808 ntBASIC26.67■■□□□ 1.86
TMEM40Q8WWA1 AC087393.1-201ENST00000582896 145 ntBASIC26.67■■□□□ 1.86
TMEM40Q8WWA1 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC26.67■■□□□ 1.86
TMEM40Q8WWA1 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
TMEM40Q8WWA1 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
TMEM40Q8WWA1 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC26.66■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 173 ms