Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC28.07■■■□□ 2.08
SH3RF1Q7Z6J0 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
SH3RF1Q7Z6J0 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
SH3RF1Q7Z6J0 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
SH3RF1Q7Z6J0 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC28.06■■■□□ 2.08
SH3RF1Q7Z6J0 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
SH3RF1Q7Z6J0 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC28.06■■■□□ 2.08
SH3RF1Q7Z6J0 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
SH3RF1Q7Z6J0 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
SH3RF1Q7Z6J0 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
SH3RF1Q7Z6J0 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.08
SH3RF1Q7Z6J0 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.08
SH3RF1Q7Z6J0 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC28.05■■■□□ 2.08
SH3RF1Q7Z6J0 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.08
SH3RF1Q7Z6J0 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC28.05■■■□□ 2.08
SH3RF1Q7Z6J0 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC28.04■■■□□ 2.08
SH3RF1Q7Z6J0 CREM-210ENST00000374721 2020 ntTSL 5 BASIC28.04■■■□□ 2.08
SH3RF1Q7Z6J0 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC28.03■■■□□ 2.08
SH3RF1Q7Z6J0 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC28.03■■■□□ 2.08
SH3RF1Q7Z6J0 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC28.03■■■□□ 2.08
SH3RF1Q7Z6J0 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC28.03■■■□□ 2.08
SH3RF1Q7Z6J0 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC28.03■■■□□ 2.08
SH3RF1Q7Z6J0 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
SH3RF1Q7Z6J0 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC28.03■■■□□ 2.08
SH3RF1Q7Z6J0 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC28.02■■■□□ 2.08
SH3RF1Q7Z6J0 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
SH3RF1Q7Z6J0 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC28.02■■■□□ 2.08
SH3RF1Q7Z6J0 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC28.02■■■□□ 2.08
SH3RF1Q7Z6J0 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC28.01■■■□□ 2.08
SH3RF1Q7Z6J0 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
SH3RF1Q7Z6J0 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC28■■■□□ 2.07
SH3RF1Q7Z6J0 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC28■■■□□ 2.07
SH3RF1Q7Z6J0 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC28■■■□□ 2.07
SH3RF1Q7Z6J0 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC28■■■□□ 2.07
SH3RF1Q7Z6J0 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC28■■■□□ 2.07
SH3RF1Q7Z6J0 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC28■■■□□ 2.07
SH3RF1Q7Z6J0 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC28■■■□□ 2.07
SH3RF1Q7Z6J0 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC28■■■□□ 2.07
SH3RF1Q7Z6J0 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC28■■■□□ 2.07
SH3RF1Q7Z6J0 AC019069.1-201ENST00000610008 1333 ntBASIC27.99■■■□□ 2.07
SH3RF1Q7Z6J0 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC27.99■■■□□ 2.07
SH3RF1Q7Z6J0 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
SH3RF1Q7Z6J0 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
SH3RF1Q7Z6J0 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC27.99■■■□□ 2.07
SH3RF1Q7Z6J0 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC27.98■■■□□ 2.07
SH3RF1Q7Z6J0 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC27.97■■■□□ 2.07
SH3RF1Q7Z6J0 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
SH3RF1Q7Z6J0 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC27.97■■■□□ 2.07
SH3RF1Q7Z6J0 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
SH3RF1Q7Z6J0 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC27.97■■■□□ 2.07
SH3RF1Q7Z6J0 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC27.97■■■□□ 2.07
SH3RF1Q7Z6J0 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
SH3RF1Q7Z6J0 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
SH3RF1Q7Z6J0 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
SH3RF1Q7Z6J0 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC27.96■■■□□ 2.07
SH3RF1Q7Z6J0 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC27.96■■■□□ 2.07
SH3RF1Q7Z6J0 REST-210ENST00000638187 1334 ntTSL 5 BASIC27.95■■■□□ 2.07
SH3RF1Q7Z6J0 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
SH3RF1Q7Z6J0 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC27.95■■■□□ 2.06
SH3RF1Q7Z6J0 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC27.95■■■□□ 2.06
SH3RF1Q7Z6J0 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC27.95■■■□□ 2.06
SH3RF1Q7Z6J0 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC27.95■■■□□ 2.06
SH3RF1Q7Z6J0 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC27.94■■■□□ 2.06
SH3RF1Q7Z6J0 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC27.94■■■□□ 2.06
SH3RF1Q7Z6J0 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
SH3RF1Q7Z6J0 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
SH3RF1Q7Z6J0 AL449106.1-201ENST00000608517 1980 ntBASIC27.94■■■□□ 2.06
SH3RF1Q7Z6J0 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
SH3RF1Q7Z6J0 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
SH3RF1Q7Z6J0 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
SH3RF1Q7Z6J0 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC27.93■■■□□ 2.06
SH3RF1Q7Z6J0 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC27.93■■■□□ 2.06
SH3RF1Q7Z6J0 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
SH3RF1Q7Z6J0 AC026202.3-201ENST00000600805 1127 ntBASIC27.93■■■□□ 2.06
SH3RF1Q7Z6J0 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC27.93■■■□□ 2.06
SH3RF1Q7Z6J0 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC27.93■■■□□ 2.06
SH3RF1Q7Z6J0 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
SH3RF1Q7Z6J0 SHF-207ENST00000560540 2062 ntTSL 5 BASIC27.93■■■□□ 2.06
SH3RF1Q7Z6J0 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC27.92■■■□□ 2.06
SH3RF1Q7Z6J0 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC27.92■■■□□ 2.06
SH3RF1Q7Z6J0 AC010980.1-201ENST00000587192 1142 ntBASIC27.92■■■□□ 2.06
SH3RF1Q7Z6J0 KRT8P33-201ENST00000508125 1423 ntBASIC27.92■■■□□ 2.06
SH3RF1Q7Z6J0 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC27.92■■■□□ 2.06
SH3RF1Q7Z6J0 SMPD5-203ENST00000639008 1464 ntBASIC27.91■■■□□ 2.06
SH3RF1Q7Z6J0 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
SH3RF1Q7Z6J0 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
SH3RF1Q7Z6J0 DUX4L9-201ENST00000449051 1259 ntBASIC27.91■■■□□ 2.06
SH3RF1Q7Z6J0 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC27.91■■■□□ 2.06
SH3RF1Q7Z6J0 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC27.9■■■□□ 2.06
SH3RF1Q7Z6J0 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC27.9■■■□□ 2.06
SH3RF1Q7Z6J0 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC27.9■■■□□ 2.06
SH3RF1Q7Z6J0 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC27.89■■■□□ 2.06
SH3RF1Q7Z6J0 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
SH3RF1Q7Z6J0 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC27.89■■■□□ 2.06
SH3RF1Q7Z6J0 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC27.88■■■□□ 2.05
SH3RF1Q7Z6J0 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC27.88■■■□□ 2.05
SH3RF1Q7Z6J0 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC27.88■■■□□ 2.05
SH3RF1Q7Z6J0 BHLHE23-202ENST00000612929 1109 ntBASIC27.88■■■□□ 2.05
SH3RF1Q7Z6J0 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC27.88■■■□□ 2.05
SH3RF1Q7Z6J0 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms