Protein–RNA interactions for Protein: Q6MZP7

LIN54, Protein lin-54 homolog, humanhuman

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54Q6MZP7 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LIN54Q6MZP7 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.67■□□□□ 0.9
LIN54Q6MZP7 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
LIN54Q6MZP7 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
LIN54Q6MZP7 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LIN54Q6MZP7 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LIN54Q6MZP7 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LIN54Q6MZP7 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LIN54Q6MZP7 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LIN54Q6MZP7 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LIN54Q6MZP7 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
LIN54Q6MZP7 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.65■□□□□ 0.9
LIN54Q6MZP7 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.64■□□□□ 0.9
LIN54Q6MZP7 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
LIN54Q6MZP7 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.64■□□□□ 0.89
LIN54Q6MZP7 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
LIN54Q6MZP7 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
LIN54Q6MZP7 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LIN54Q6MZP7 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LIN54Q6MZP7 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LIN54Q6MZP7 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
LIN54Q6MZP7 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LIN54Q6MZP7 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LIN54Q6MZP7 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
LIN54Q6MZP7 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LIN54Q6MZP7 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
LIN54Q6MZP7 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.62■□□□□ 0.89
LIN54Q6MZP7 ERN1-208ENST00000606895 2068 ntBASIC20.62■□□□□ 0.89
LIN54Q6MZP7 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
LIN54Q6MZP7 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LIN54Q6MZP7 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
LIN54Q6MZP7 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.61■□□□□ 0.89
LIN54Q6MZP7 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
LIN54Q6MZP7 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.61■□□□□ 0.89
LIN54Q6MZP7 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.61■□□□□ 0.89
LIN54Q6MZP7 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LIN54Q6MZP7 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LIN54Q6MZP7 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LIN54Q6MZP7 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
LIN54Q6MZP7 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.6■□□□□ 0.89
LIN54Q6MZP7 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
LIN54Q6MZP7 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
LIN54Q6MZP7 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
LIN54Q6MZP7 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LIN54Q6MZP7 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LIN54Q6MZP7 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
LIN54Q6MZP7 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.59■□□□□ 0.89
LIN54Q6MZP7 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LIN54Q6MZP7 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LIN54Q6MZP7 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LIN54Q6MZP7 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.58■□□□□ 0.89
LIN54Q6MZP7 AP004609.3-201ENST00000610705 1884 ntBASIC20.58■□□□□ 0.89
LIN54Q6MZP7 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LIN54Q6MZP7 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
LIN54Q6MZP7 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
LIN54Q6MZP7 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
LIN54Q6MZP7 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LIN54Q6MZP7 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
LIN54Q6MZP7 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LIN54Q6MZP7 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LIN54Q6MZP7 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LIN54Q6MZP7 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LIN54Q6MZP7 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.57■□□□□ 0.88
LIN54Q6MZP7 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
LIN54Q6MZP7 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.56■□□□□ 0.88
LIN54Q6MZP7 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LIN54Q6MZP7 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LIN54Q6MZP7 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.56■□□□□ 0.88
LIN54Q6MZP7 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LIN54Q6MZP7 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LIN54Q6MZP7 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LIN54Q6MZP7 DUX4L29-201ENST00000425409 679 ntBASIC20.55■□□□□ 0.88
LIN54Q6MZP7 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LIN54Q6MZP7 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LIN54Q6MZP7 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LIN54Q6MZP7 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LIN54Q6MZP7 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
LIN54Q6MZP7 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.54■□□□□ 0.88
LIN54Q6MZP7 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LIN54Q6MZP7 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.54■□□□□ 0.88
LIN54Q6MZP7 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LIN54Q6MZP7 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
LIN54Q6MZP7 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LIN54Q6MZP7 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LIN54Q6MZP7 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LIN54Q6MZP7 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LIN54Q6MZP7 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.53■□□□□ 0.88
LIN54Q6MZP7 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.53■□□□□ 0.88
LIN54Q6MZP7 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LIN54Q6MZP7 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
LIN54Q6MZP7 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
LIN54Q6MZP7 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LIN54Q6MZP7 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
LIN54Q6MZP7 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LIN54Q6MZP7 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LIN54Q6MZP7 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.52■□□□□ 0.88
LIN54Q6MZP7 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LIN54Q6MZP7 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
LIN54Q6MZP7 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
LIN54Q6MZP7 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms