Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CDR1P51861 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CDR1P51861 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CDR1P51861 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CDR1P51861 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CDR1P51861 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC26.33■■□□□ 1.81
CDR1P51861 SMPD5-203ENST00000639008 1464 ntBASIC26.32■■□□□ 1.8
CDR1P51861 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CDR1P51861 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CDR1P51861 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CDR1P51861 LINC01003-201ENST00000564834 1764 ntBASIC26.32■■□□□ 1.8
CDR1P51861 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CDR1P51861 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
CDR1P51861 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC26.32■■□□□ 1.8
CDR1P51861 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CDR1P51861 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC26.31■■□□□ 1.8
CDR1P51861 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CDR1P51861 AL033527.3-201ENST00000566366 1196 ntBASIC26.31■■□□□ 1.8
CDR1P51861 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CDR1P51861 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CDR1P51861 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
CDR1P51861 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CDR1P51861 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC26.3■■□□□ 1.8
CDR1P51861 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
CDR1P51861 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
CDR1P51861 KRT18P60-201ENST00000312876 1297 ntBASIC26.3■■□□□ 1.8
CDR1P51861 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC26.3■■□□□ 1.8
CDR1P51861 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC26.29■■□□□ 1.8
CDR1P51861 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
CDR1P51861 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CDR1P51861 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CDR1P51861 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CDR1P51861 WHAMMP3-201ENST00000611636 1609 ntBASIC26.28■■□□□ 1.8
CDR1P51861 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC26.28■■□□□ 1.8
CDR1P51861 AC007029.1-201ENST00000604183 313 ntBASIC26.28■■□□□ 1.8
CDR1P51861 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CDR1P51861 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CDR1P51861 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CDR1P51861 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
CDR1P51861 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
CDR1P51861 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
CDR1P51861 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
CDR1P51861 AL359504.2-201ENST00000605506 1601 ntBASIC26.27■■□□□ 1.8
CDR1P51861 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
CDR1P51861 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
CDR1P51861 BX255925.1-201ENST00000566954 1854 ntBASIC26.26■■□□□ 1.79
CDR1P51861 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
CDR1P51861 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC26.26■■□□□ 1.79
CDR1P51861 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CDR1P51861 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC26.26■■□□□ 1.79
CDR1P51861 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
CDR1P51861 AC009831.1-201ENST00000580420 1582 ntBASIC26.25■■□□□ 1.79
CDR1P51861 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CDR1P51861 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC26.25■■□□□ 1.79
CDR1P51861 AC012354.3-201ENST00000623734 483 ntBASIC26.25■■□□□ 1.79
CDR1P51861 AL449106.1-201ENST00000608517 1980 ntBASIC26.25■■□□□ 1.79
CDR1P51861 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CDR1P51861 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CDR1P51861 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
CDR1P51861 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CDR1P51861 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC26.24■■□□□ 1.79
CDR1P51861 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC26.23■■□□□ 1.79
CDR1P51861 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC26.23■■□□□ 1.79
CDR1P51861 AC133552.2-201ENST00000619106 1032 ntBASIC26.23■■□□□ 1.79
CDR1P51861 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
CDR1P51861 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC26.22■■□□□ 1.79
CDR1P51861 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CDR1P51861 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
CDR1P51861 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
CDR1P51861 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CDR1P51861 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC26.21■■□□□ 1.79
CDR1P51861 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CDR1P51861 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC26.21■■□□□ 1.79
CDR1P51861 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC26.21■■□□□ 1.79
CDR1P51861 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CDR1P51861 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC26.21■■□□□ 1.79
CDR1P51861 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC26.2■■□□□ 1.79
CDR1P51861 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.79
CDR1P51861 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CDR1P51861 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
CDR1P51861 AL592293.1-201ENST00000502889 1188 ntBASIC26.2■■□□□ 1.78
CDR1P51861 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CDR1P51861 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CDR1P51861 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC26.2■■□□□ 1.78
CDR1P51861 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC26.2■■□□□ 1.78
CDR1P51861 REST-210ENST00000638187 1334 ntTSL 5 BASIC26.19■■□□□ 1.78
CDR1P51861 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
CDR1P51861 AC004987.1-201ENST00000428627 508 ntBASIC26.19■■□□□ 1.78
CDR1P51861 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC26.19■■□□□ 1.78
CDR1P51861 DUX4L18-201ENST00000553347 1267 ntBASIC26.19■■□□□ 1.78
CDR1P51861 AC025884.2-201ENST00000553429 711 ntBASIC26.19■■□□□ 1.78
CDR1P51861 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC26.19■■□□□ 1.78
CDR1P51861 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC26.18■■□□□ 1.78
CDR1P51861 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
CDR1P51861 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
CDR1P51861 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CDR1P51861 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
CDR1P51861 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
CDR1P51861 AC093536.1-201ENST00000569153 554 ntBASIC26.18■■□□□ 1.78
CDR1P51861 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms