Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCR9P51686 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CCR9P51686 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CCR9P51686 ERN1-208ENST00000606895 2068 ntBASIC21.33■■□□□ 1.01
CCR9P51686 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CCR9P51686 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
CCR9P51686 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCR9P51686 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.33■■□□□ 1.01
CCR9P51686 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCR9P51686 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
CCR9P51686 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CCR9P51686 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCR9P51686 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCR9P51686 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCR9P51686 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCR9P51686 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
CCR9P51686 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.32■■□□□ 1
CCR9P51686 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.31■■□□□ 1
CCR9P51686 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.31■■□□□ 1
CCR9P51686 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.31■■□□□ 1
CCR9P51686 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
CCR9P51686 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.31■■□□□ 1
CCR9P51686 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCR9P51686 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.3■■□□□ 1
CCR9P51686 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CCR9P51686 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.3■■□□□ 1
CCR9P51686 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCR9P51686 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCR9P51686 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CCR9P51686 AC008813.1-201ENST00000536597 885 ntBASIC21.29■■□□□ 1
CCR9P51686 LINC01971-201ENST00000617888 1048 ntBASIC21.29■■□□□ 1
CCR9P51686 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC21.29■■□□□ 1
CCR9P51686 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.29■■□□□ 1
CCR9P51686 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCR9P51686 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCR9P51686 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.28■■□□□ 1
CCR9P51686 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CCR9P51686 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCR9P51686 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCR9P51686 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CCR9P51686 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCR9P51686 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.27■■□□□ 1
CCR9P51686 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.27■■□□□ 1
CCR9P51686 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCR9P51686 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
CCR9P51686 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCR9P51686 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCR9P51686 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.26■□□□□ 0.99
CCR9P51686 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCR9P51686 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCR9P51686 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCR9P51686 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CCR9P51686 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCR9P51686 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.26■□□□□ 0.99
CCR9P51686 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.26■□□□□ 0.99
CCR9P51686 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCR9P51686 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
CCR9P51686 AC142381.3-201ENST00000568208 1670 ntBASIC21.25■□□□□ 0.99
CCR9P51686 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCR9P51686 DUX4L13-201ENST00000554103 1267 ntBASIC21.25■□□□□ 0.99
CCR9P51686 DUX4L15-201ENST00000611059 1267 ntBASIC21.25■□□□□ 0.99
CCR9P51686 DUX4L23-201ENST00000615195 1269 ntBASIC21.25■□□□□ 0.99
CCR9P51686 DUX4L24-201ENST00000617576 1269 ntBASIC21.25■□□□□ 0.99
CCR9P51686 DUX4L22-201ENST00000618238 1269 ntBASIC21.25■□□□□ 0.99
CCR9P51686 DUX4L20-201ENST00000619712 1269 ntBASIC21.25■□□□□ 0.99
CCR9P51686 DUX4L21-201ENST00000622058 1269 ntBASIC21.25■□□□□ 0.99
CCR9P51686 DUX4L10-201ENST00000622460 1267 ntBASIC21.25■□□□□ 0.99
CCR9P51686 DUX4L25-201ENST00000624915 1269 ntBASIC21.25■□□□□ 0.99
CCR9P51686 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCR9P51686 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCR9P51686 AC148477.6-201ENST00000623746 465 ntBASIC21.24■□□□□ 0.99
CCR9P51686 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.24■□□□□ 0.99
CCR9P51686 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCR9P51686 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
CCR9P51686 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCR9P51686 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCR9P51686 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCR9P51686 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
CCR9P51686 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCR9P51686 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCR9P51686 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.23■□□□□ 0.99
CCR9P51686 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CCR9P51686 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCR9P51686 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCR9P51686 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCR9P51686 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CCR9P51686 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
CCR9P51686 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.22■□□□□ 0.99
CCR9P51686 MIR219A2-201ENST00000608502 1504 ntBASIC21.22■□□□□ 0.99
CCR9P51686 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
CCR9P51686 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCR9P51686 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.22■□□□□ 0.99
CCR9P51686 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCR9P51686 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.21■□□□□ 0.99
CCR9P51686 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
CCR9P51686 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.21■□□□□ 0.99
CCR9P51686 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CCR9P51686 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCR9P51686 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCR9P51686 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms