Protein–RNA interactions for Protein: P39940

RSP5, E3 ubiquitin-protein ligase RSP5, yeastyeast

Known RBP Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RSP5P39940 CDC3YLR314C 1563 nt6.88□□□□□ -1.31
RSP5P39940 CRF1YDR223W 1404 nt6.88□□□□□ -1.31
RSP5P39940 MPC54YOR177C 1395 nt6.88□□□□□ -1.31
RSP5P39940 TIF34YMR146C 1044 nt6.88□□□□□ -1.31
RSP5P39940 MTF1YMR228W 1026 nt6.88□□□□□ -1.31
RSP5P39940 SCP1YOR367W 603 nt6.88□□□□□ -1.31
RSP5P39940 CDC13YDL220C 2775 nt6.88□□□□□ -1.31
RSP5P39940 RDR1YOR380W 1641 nt6.87□□□□□ -1.31
RSP5P39940 CDC7YDL017W 1524 nt6.87□□□□□ -1.31
RSP5P39940 NFI1YOR156C 2181 nt6.87□□□□□ -1.31
RSP5P39940 YCR041WYCR041W 333 nt6.87□□□□□ -1.31
RSP5P39940 CDC34YDR054C 888 nt6.87□□□□□ -1.31
RSP5P39940 LSM6YDR378C 261 nt6.87□□□□□ -1.31
RSP5P39940 EDC2YER035W 438 nt6.87□□□□□ -1.31
RSP5P39940 YJR142WYJR142W 1029 nt6.87□□□□□ -1.31
RSP5P39940 YLL017WYLL017W 312 nt6.87□□□□□ -1.31
RSP5P39940 YLR412C-AYLR412C-A 207 nt6.87□□□□□ -1.31
RSP5P39940 MFA2YNL145W 117 nt6.87□□□□□ -1.31
RSP5P39940 ADH5YBR145W 1056 nt6.87□□□□□ -1.31
RSP5P39940 NMD5YJR132W 3147 nt6.87□□□□□ -1.31
RSP5P39940 NUP53YMR153W 1428 nt6.86□□□□□ -1.31
RSP5P39940 GRH1YDR517W 1119 nt6.86□□□□□ -1.31
RSP5P39940 YDR541CYDR541C 1035 nt6.86□□□□□ -1.31
RSP5P39940 SRV2YNL138W 1581 nt6.86□□□□□ -1.31
RSP5P39940 SRP101YDR292C 1866 nt6.85□□□□□ -1.31
RSP5P39940 PHM8YER037W 966 nt6.85□□□□□ -1.31
RSP5P39940 YGR068W-AYGR068W-A 96 nt6.85□□□□□ -1.31
RSP5P39940 YIA6YIL006W 1122 nt6.85□□□□□ -1.31
RSP5P39940 PRP46YPL151C 1356 nt6.84□□□□□ -1.31
RSP5P39940 TOS1YBR162C 1368 nt6.84□□□□□ -1.31
RSP5P39940 OSW5YMR148W 447 nt6.84□□□□□ -1.31
RSP5P39940 YOR012WYOR012W 414 nt6.84□□□□□ -1.31
RSP5P39940 YBR027CYBR027C 333 nt6.84□□□□□ -1.31
RSP5P39940 MRP1YDR347W 966 nt6.83□□□□□ -1.32
RSP5P39940 SRY1YKL218C 981 nt6.83□□□□□ -1.32
RSP5P39940 OMA1YKR087C 1038 nt6.83□□□□□ -1.32
RSP5P39940 ADE1YAR015W 921 nt6.83□□□□□ -1.32
RSP5P39940 CCW12YLR110C 402 nt6.83□□□□□ -1.32
RSP5P39940 NCE103YNL036W 666 nt6.83□□□□□ -1.32
RSP5P39940 UBA3YPR066W 900 nt6.83□□□□□ -1.32
RSP5P39940 SIT1YEL065W 1887 nt6.83□□□□□ -1.32
RSP5P39940 SKI8YGL213C 1194 nt6.82□□□□□ -1.32
RSP5P39940 SOD2YHR008C 702 nt6.82□□□□□ -1.32
RSP5P39940 YUR1YJL139C 1287 nt6.82□□□□□ -1.32
RSP5P39940 YML131WYML131W 1098 nt6.82□□□□□ -1.32
RSP5P39940 YBL070CYBL070C 321 nt6.82□□□□□ -1.32
RSP5P39940 IRS4YKR019C 1848 nt6.82□□□□□ -1.32
RSP5P39940 YLR112WYLR112W 420 nt6.81□□□□□ -1.32
RSP5P39940 YMR074CYMR074C 438 nt6.81□□□□□ -1.32
RSP5P39940 RAD17YOR368W 1206 nt6.81□□□□□ -1.32
RSP5P39940 VHS1YDR247W 1386 nt6.81□□□□□ -1.32
RSP5P39940 HRB1YNL004W 1365 nt6.81□□□□□ -1.32
RSP5P39940 EDC3YEL015W 1656 nt6.81□□□□□ -1.32
RSP5P39940 MIF2YKL089W 1650 nt6.81□□□□□ -1.32
RSP5P39940 PGI1YBR196C 1665 nt6.81□□□□□ -1.32
RSP5P39940 YLR402WYLR402W 192 nt6.8□□□□□ -1.32
RSP5P39940 MRPL4YLR439W 960 nt6.8□□□□□ -1.32
RSP5P39940 ARO9YHR137W 1542 nt6.8□□□□□ -1.32
RSP5P39940 FET3YMR058W 1911 nt6.8□□□□□ -1.32
RSP5P39940 NUP84YDL116W 2181 nt6.79□□□□□ -1.32
RSP5P39940 MCM21YDR318W 1107 nt6.79□□□□□ -1.32
RSP5P39940 SUF3tG(CCC)D 72 nt6.79□□□□□ -1.32
RSP5P39940 YGL081WYGL081W 963 nt6.79□□□□□ -1.32
RSP5P39940 NMA2YGR010W 1188 nt6.79□□□□□ -1.32
RSP5P39940 YOL050CYOL050C 321 nt6.79□□□□□ -1.32
RSP5P39940 OAZ1YPL052W 879 nt6.79□□□□□ -1.32
RSP5P39940 GYP8YFL027C 1494 nt6.79□□□□□ -1.32
RSP5P39940 LAP2YNL045W 2016 nt6.78□□□□□ -1.32
RSP5P39940 PET117YER058W 324 nt6.78□□□□□ -1.32
RSP5P39940 SUN4YNL066W 1263 nt6.78□□□□□ -1.32
RSP5P39940 TSR3YOR006C 942 nt6.78□□□□□ -1.32
RSP5P39940 SRF1YDL133W 1314 nt6.77□□□□□ -1.32
RSP5P39940 PAF1YBR279W 1338 nt6.77□□□□□ -1.32
RSP5P39940 HSM3YBR272C 1443 nt6.77□□□□□ -1.33
RSP5P39940 YDL121CYDL121C 450 nt6.77□□□□□ -1.33
RSP5P39940 YDR476CYDR476C 675 nt6.77□□□□□ -1.33
RSP5P39940 ERG27YLR100W 1044 nt6.77□□□□□ -1.33
RSP5P39940 NMD4YLR363C 657 nt6.77□□□□□ -1.33
RSP5P39940 SLD2YKL108W 1362 nt6.77□□□□□ -1.33
RSP5P39940 tL(UAA)B1tL(UAA)B1 84 nt6.76□□□□□ -1.33
RSP5P39940 tL(UAA)B2tL(UAA)B2 84 nt6.76□□□□□ -1.33
RSP5P39940 tL(UAA)DtL(UAA)D 84 nt6.76□□□□□ -1.33
RSP5P39940 SUP51tL(UAA)J 84 nt6.76□□□□□ -1.33
RSP5P39940 tL(UAA)KtL(UAA)K 84 nt6.76□□□□□ -1.33
RSP5P39940 tL(UAA)LtL(UAA)L 84 nt6.76□□□□□ -1.33
RSP5P39940 tL(UAA)NtL(UAA)N 84 nt6.76□□□□□ -1.33
RSP5P39940 PIL1YGR086C 1020 nt6.76□□□□□ -1.33
RSP5P39940 YIL086CYIL086C 309 nt6.76□□□□□ -1.33
RSP5P39940 EFM3YJR129C 1020 nt6.76□□□□□ -1.33
RSP5P39940 OAC1YKL120W 975 nt6.76□□□□□ -1.33
RSP5P39940 SED5YLR026C 1023 nt6.76□□□□□ -1.33
RSP5P39940 YLR283WYLR283W 945 nt6.76□□□□□ -1.33
RSP5P39940 YOL024WYOL024W 519 nt6.76□□□□□ -1.33
RSP5P39940 RPL43AYPR043W 279 nt6.76□□□□□ -1.33
RSP5P39940 SNT309YPR101W 528 nt6.76□□□□□ -1.33
RSP5P39940 SDH8YBR269C 417 nt6.76□□□□□ -1.33
RSP5P39940 GIT1YCR098C 1557 nt6.76□□□□□ -1.33
RSP5P39940 YBL111CYBL111C 2004 nt6.76□□□□□ -1.33
RSP5P39940 YDR514CYDR514C 1452 nt6.75□□□□□ -1.33
RSP5P39940 HHY1YEL059W 309 nt6.75□□□□□ -1.33
Retrieved 100 of 7,029 protein–RNA pairs in 45.9 ms