Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC30.62■■■□□ 2.49
PDE6BP35913 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC30.62■■■□□ 2.49
PDE6BP35913 WHAMMP3-201ENST00000611636 1609 ntBASIC30.62■■■□□ 2.49
PDE6BP35913 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
PDE6BP35913 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
PDE6BP35913 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC30.61■■■□□ 2.49
PDE6BP35913 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC30.61■■■□□ 2.49
PDE6BP35913 LONRF2P2-201ENST00000439212 571 ntBASIC30.61■■■□□ 2.49
PDE6BP35913 RPS2P7-201ENST00000447334 885 ntBASIC30.61■■■□□ 2.49
PDE6BP35913 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
PDE6BP35913 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC30.6■■■□□ 2.49
PDE6BP35913 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC30.6■■■□□ 2.49
PDE6BP35913 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC30.6■■■□□ 2.49
PDE6BP35913 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC30.59■■■□□ 2.49
PDE6BP35913 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC30.59■■■□□ 2.49
PDE6BP35913 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
PDE6BP35913 AC008406.3-201ENST00000620001 1374 ntBASIC30.59■■■□□ 2.49
PDE6BP35913 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
PDE6BP35913 CREM-229ENST00000474362 1030 ntTSL 2 BASIC30.59■■■□□ 2.49
PDE6BP35913 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
PDE6BP35913 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC30.58■■■□□ 2.49
PDE6BP35913 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC30.58■■■□□ 2.49
PDE6BP35913 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
PDE6BP35913 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC30.57■■■□□ 2.48
PDE6BP35913 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC30.57■■■□□ 2.48
PDE6BP35913 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
PDE6BP35913 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
PDE6BP35913 GRAMD4P7-201ENST00000578182 1232 ntBASIC30.56■■■□□ 2.48
PDE6BP35913 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC30.56■■■□□ 2.48
PDE6BP35913 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
PDE6BP35913 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
PDE6BP35913 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
PDE6BP35913 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
PDE6BP35913 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
PDE6BP35913 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC30.55■■■□□ 2.48
PDE6BP35913 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
PDE6BP35913 LSM7-203ENST00000585409 512 ntTSL 2 BASIC30.55■■■□□ 2.48
PDE6BP35913 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
PDE6BP35913 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC30.54■■■□□ 2.48
PDE6BP35913 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
PDE6BP35913 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC30.54■■■□□ 2.48
PDE6BP35913 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC30.53■■■□□ 2.48
PDE6BP35913 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
PDE6BP35913 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC30.52■■■□□ 2.48
PDE6BP35913 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
PDE6BP35913 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
PDE6BP35913 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC30.52■■■□□ 2.48
PDE6BP35913 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
PDE6BP35913 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC30.51■■■□□ 2.47
PDE6BP35913 KRT125P-201ENST00000546827 989 ntBASIC30.51■■■□□ 2.47
PDE6BP35913 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
PDE6BP35913 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
PDE6BP35913 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
PDE6BP35913 MIR935-201ENST00000401179 91 ntBASIC30.5■■■□□ 2.47
PDE6BP35913 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
PDE6BP35913 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC30.49■■■□□ 2.47
PDE6BP35913 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC30.49■■■□□ 2.47
PDE6BP35913 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
PDE6BP35913 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC30.49■■■□□ 2.47
PDE6BP35913 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
PDE6BP35913 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
PDE6BP35913 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC30.48■■■□□ 2.47
PDE6BP35913 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC30.48■■■□□ 2.47
PDE6BP35913 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC30.48■■■□□ 2.47
PDE6BP35913 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
PDE6BP35913 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC30.47■■■□□ 2.47
PDE6BP35913 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
PDE6BP35913 MIR4787-201ENST00000607364 84 ntBASIC30.47■■■□□ 2.47
PDE6BP35913 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
PDE6BP35913 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC30.46■■■□□ 2.47
PDE6BP35913 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC30.46■■■□□ 2.47
PDE6BP35913 BX664725.1-201ENST00000438252 379 ntBASIC30.46■■■□□ 2.47
PDE6BP35913 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC30.46■■■□□ 2.47
PDE6BP35913 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC30.45■■■□□ 2.47
PDE6BP35913 PEMT-206ENST00000435340 960 ntTSL 5 BASIC30.45■■■□□ 2.47
PDE6BP35913 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC30.45■■■□□ 2.47
PDE6BP35913 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
PDE6BP35913 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
PDE6BP35913 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC30.44■■■□□ 2.46
PDE6BP35913 AC022616.5-201ENST00000518796 181 ntBASIC30.44■■■□□ 2.46
PDE6BP35913 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC30.44■■■□□ 2.46
PDE6BP35913 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC30.44■■■□□ 2.46
PDE6BP35913 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC30.44■■■□□ 2.46
PDE6BP35913 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
PDE6BP35913 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
PDE6BP35913 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
PDE6BP35913 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
PDE6BP35913 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC30.42■■■□□ 2.46
PDE6BP35913 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
PDE6BP35913 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
PDE6BP35913 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
PDE6BP35913 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC30.41■■■□□ 2.46
PDE6BP35913 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC30.41■■■□□ 2.46
PDE6BP35913 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC30.41■■■□□ 2.46
PDE6BP35913 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
PDE6BP35913 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC30.4■■■□□ 2.46
PDE6BP35913 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC30.4■■■□□ 2.46
PDE6BP35913 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
PDE6BP35913 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
PDE6BP35913 KRT18P10-201ENST00000388836 1287 ntBASIC30.39■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms