Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
LINGO3P0C6S8 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
LINGO3P0C6S8 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
LINGO3P0C6S8 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
LINGO3P0C6S8 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
LINGO3P0C6S8 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
LINGO3P0C6S8 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
LINGO3P0C6S8 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
LINGO3P0C6S8 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
LINGO3P0C6S8 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
LINGO3P0C6S8 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
LINGO3P0C6S8 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.38■■□□□ 1.33
LINGO3P0C6S8 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
LINGO3P0C6S8 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.37■■□□□ 1.33
LINGO3P0C6S8 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC23.37■■□□□ 1.33
LINGO3P0C6S8 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
LINGO3P0C6S8 DUSP8P4-201ENST00000399538 1761 ntBASIC23.37■■□□□ 1.33
LINGO3P0C6S8 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
LINGO3P0C6S8 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.36■■□□□ 1.33
LINGO3P0C6S8 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.36■■□□□ 1.33
LINGO3P0C6S8 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.36■■□□□ 1.33
LINGO3P0C6S8 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC23.36■■□□□ 1.33
LINGO3P0C6S8 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
LINGO3P0C6S8 WHAMMP2-203ENST00000563942 1603 ntBASIC23.36■■□□□ 1.33
LINGO3P0C6S8 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.36■■□□□ 1.33
LINGO3P0C6S8 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
LINGO3P0C6S8 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.36■■□□□ 1.33
LINGO3P0C6S8 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
LINGO3P0C6S8 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC23.35■■□□□ 1.33
LINGO3P0C6S8 CASK-201ENST00000378154 2494 ntTSL 5 BASIC23.35■■□□□ 1.33
LINGO3P0C6S8 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
LINGO3P0C6S8 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
LINGO3P0C6S8 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
LINGO3P0C6S8 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
LINGO3P0C6S8 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
LINGO3P0C6S8 ABHD17AP4-201ENST00000411545 909 ntBASIC23.34■■□□□ 1.33
LINGO3P0C6S8 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC23.34■■□□□ 1.33
LINGO3P0C6S8 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
LINGO3P0C6S8 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
LINGO3P0C6S8 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
LINGO3P0C6S8 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
LINGO3P0C6S8 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
LINGO3P0C6S8 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.33■■□□□ 1.33
LINGO3P0C6S8 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.33■■□□□ 1.33
LINGO3P0C6S8 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.33■■□□□ 1.33
LINGO3P0C6S8 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC23.33■■□□□ 1.33
LINGO3P0C6S8 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
LINGO3P0C6S8 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
LINGO3P0C6S8 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
LINGO3P0C6S8 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
LINGO3P0C6S8 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
LINGO3P0C6S8 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
LINGO3P0C6S8 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.32■■□□□ 1.32
LINGO3P0C6S8 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
LINGO3P0C6S8 ZNRF2P2-203ENST00000454624 420 ntBASIC23.31■■□□□ 1.32
LINGO3P0C6S8 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
LINGO3P0C6S8 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.31■■□□□ 1.32
LINGO3P0C6S8 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
LINGO3P0C6S8 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
LINGO3P0C6S8 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
LINGO3P0C6S8 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.3■■□□□ 1.32
LINGO3P0C6S8 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
LINGO3P0C6S8 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.3■■□□□ 1.32
LINGO3P0C6S8 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.3■■□□□ 1.32
LINGO3P0C6S8 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
LINGO3P0C6S8 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
LINGO3P0C6S8 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
LINGO3P0C6S8 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
LINGO3P0C6S8 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
LINGO3P0C6S8 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.28■■□□□ 1.32
LINGO3P0C6S8 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
LINGO3P0C6S8 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
LINGO3P0C6S8 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.27■■□□□ 1.32
LINGO3P0C6S8 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
LINGO3P0C6S8 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
LINGO3P0C6S8 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
LINGO3P0C6S8 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
LINGO3P0C6S8 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
LINGO3P0C6S8 LINC01971-201ENST00000617888 1048 ntBASIC23.26■■□□□ 1.31
LINGO3P0C6S8 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC23.26■■□□□ 1.31
LINGO3P0C6S8 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC23.26■■□□□ 1.31
LINGO3P0C6S8 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
LINGO3P0C6S8 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
LINGO3P0C6S8 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.24■■□□□ 1.31
LINGO3P0C6S8 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
LINGO3P0C6S8 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
LINGO3P0C6S8 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
LINGO3P0C6S8 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
LINGO3P0C6S8 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
LINGO3P0C6S8 AP002414.2-202ENST00000590929 1450 ntBASIC23.24■■□□□ 1.31
LINGO3P0C6S8 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
LINGO3P0C6S8 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
LINGO3P0C6S8 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
LINGO3P0C6S8 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
LINGO3P0C6S8 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
LINGO3P0C6S8 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
LINGO3P0C6S8 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC23.22■■□□□ 1.31
LINGO3P0C6S8 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
LINGO3P0C6S8 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC23.21■■□□□ 1.31
LINGO3P0C6S8 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms