Protein–RNA interactions for Protein: A8MSI8

LYRM9, LYR motif-containing protein 9, humanhuman

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM9A8MSI8 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
LYRM9A8MSI8 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LYRM9A8MSI8 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC17.4■□□□□ 0.38
LYRM9A8MSI8 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LYRM9A8MSI8 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
LYRM9A8MSI8 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LYRM9A8MSI8 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC17.39■□□□□ 0.37
LYRM9A8MSI8 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
LYRM9A8MSI8 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LYRM9A8MSI8 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
LYRM9A8MSI8 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LYRM9A8MSI8 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
LYRM9A8MSI8 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
LYRM9A8MSI8 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LYRM9A8MSI8 HYI-213ENST00000583037 1322 ntTSL 5 BASIC17.38■□□□□ 0.37
LYRM9A8MSI8 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LYRM9A8MSI8 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LYRM9A8MSI8 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
LYRM9A8MSI8 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
LYRM9A8MSI8 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LYRM9A8MSI8 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
LYRM9A8MSI8 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
LYRM9A8MSI8 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LYRM9A8MSI8 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC17.37■□□□□ 0.37
LYRM9A8MSI8 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC17.37■□□□□ 0.37
LYRM9A8MSI8 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
LYRM9A8MSI8 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LYRM9A8MSI8 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LYRM9A8MSI8 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
LYRM9A8MSI8 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LYRM9A8MSI8 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LYRM9A8MSI8 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC17.36■□□□□ 0.37
LYRM9A8MSI8 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LYRM9A8MSI8 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LYRM9A8MSI8 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LYRM9A8MSI8 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LYRM9A8MSI8 AC026202.3-201ENST00000600805 1127 ntBASIC17.35■□□□□ 0.37
LYRM9A8MSI8 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
LYRM9A8MSI8 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LYRM9A8MSI8 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LYRM9A8MSI8 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LYRM9A8MSI8 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LYRM9A8MSI8 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
LYRM9A8MSI8 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
LYRM9A8MSI8 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
LYRM9A8MSI8 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
LYRM9A8MSI8 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LYRM9A8MSI8 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC17.34■□□□□ 0.37
LYRM9A8MSI8 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC17.34■□□□□ 0.37
LYRM9A8MSI8 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LYRM9A8MSI8 RAP2CP1-202ENST00000605179 643 ntBASIC17.34■□□□□ 0.37
LYRM9A8MSI8 AC133552.2-201ENST00000619106 1032 ntBASIC17.34■□□□□ 0.37
LYRM9A8MSI8 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC17.34■□□□□ 0.37
LYRM9A8MSI8 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC17.33■□□□□ 0.37
LYRM9A8MSI8 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LYRM9A8MSI8 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LYRM9A8MSI8 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LYRM9A8MSI8 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LYRM9A8MSI8 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
LYRM9A8MSI8 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
LYRM9A8MSI8 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC17.33■□□□□ 0.36
LYRM9A8MSI8 PKM-203ENST00000389093 2279 ntTSL 5 BASIC17.33■□□□□ 0.36
LYRM9A8MSI8 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC17.33■□□□□ 0.36
LYRM9A8MSI8 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC17.33■□□□□ 0.36
LYRM9A8MSI8 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LYRM9A8MSI8 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LYRM9A8MSI8 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LYRM9A8MSI8 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LYRM9A8MSI8 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LYRM9A8MSI8 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
LYRM9A8MSI8 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LYRM9A8MSI8 NTF6A-201ENST00000591175 560 ntBASIC17.32■□□□□ 0.36
LYRM9A8MSI8 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
LYRM9A8MSI8 AC009831.1-201ENST00000580420 1582 ntBASIC17.32■□□□□ 0.36
LYRM9A8MSI8 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LYRM9A8MSI8 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LYRM9A8MSI8 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LYRM9A8MSI8 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC17.31■□□□□ 0.36
LYRM9A8MSI8 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LYRM9A8MSI8 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LYRM9A8MSI8 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
LYRM9A8MSI8 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LYRM9A8MSI8 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LYRM9A8MSI8 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LYRM9A8MSI8 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC17.3■□□□□ 0.36
LYRM9A8MSI8 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LYRM9A8MSI8 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC17.29■□□□□ 0.36
LYRM9A8MSI8 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LYRM9A8MSI8 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LYRM9A8MSI8 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LYRM9A8MSI8 U85056.1-201ENST00000616429 682 ntBASIC17.29■□□□□ 0.36
LYRM9A8MSI8 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
LYRM9A8MSI8 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LYRM9A8MSI8 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC17.29■□□□□ 0.36
LYRM9A8MSI8 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LYRM9A8MSI8 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LYRM9A8MSI8 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LYRM9A8MSI8 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LYRM9A8MSI8 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LYRM9A8MSI8 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms