Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 STAG3L5P-207ENST00000493499 751 ntTSL 210.74□□□□□ -0.697e-10■□□□□ 9.2
SRSF1Q07955 MAPRE3-204ENST00000458529 878 ntTSL 510.72□□□□□ -0.697e-8■□□□□ 9.2
SRSF1Q07955 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC10.28□□□□□ -0.767e-10■□□□□ 9.2
SRSF1Q07955 PRICKLE3-205ENST00000540849 2246 ntTSL 210.11□□□□□ -0.797e-8■□□□□ 9.2
SRSF1Q07955 USP14-203ENST00000400266 1681 ntTSL 2 BASIC10.09□□□□□ -0.797e-8■□□□□ 9.2
SRSF1Q07955 USP14-202ENST00000383589 2168 ntTSL 5 BASIC10.01□□□□□ -0.817e-8■□□□□ 9.2
SRSF1Q07955 MAPRE3-202ENST00000402218 1001 ntTSL 5 BASIC9.48□□□□□ -0.897e-8■□□□□ 9.2
SRSF1Q07955 RN7SKP80-201ENST00000365188 283 ntBASIC8.99□□□□□ -0.977e-8■□□□□ 9.2
SRSF1Q07955 USP14-205ENST00000578942 3189 ntTSL 28.27□□□□□ -1.097e-8■□□□□ 9.2
SRSF1Q07955 USP14-201ENST00000261601 4921 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.347e-8■□□□□ 9.2
SRSF1Q07955 BCCIP-204ENST00000463330 500 ntTSL 33.51□□□□□ -1.857e-10■□□□□ 9.2
SRSF1Q07955 USP14-209ENST00000583119 578 ntTSL 53.15□□□□□ -1.917e-8■□□□□ 9.2
SRSF1Q07955 RFX7-203ENST00000560792 518 ntAPPRIS ALT2 TSL 45.98□□□□□ -1.453e-6■□□□□ 9.2
SRSF1Q07955 RFX7-202ENST00000559847 4165 ntTSL 1 (best)3.82□□□□□ -1.83e-6■□□□□ 9.2
SRSF1Q07955 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.35□□□□□ -1.873e-6■□□□□ 9.2
SRSF1Q07955 FAM50A-201ENST00000158526 1240 ntTSL 517.28■□□□□ 0.367e-9■□□□□ 9.2
SRSF1Q07955 TOX3-203ENST00000563091 572 ntTSL 47.7□□□□□ -1.187e-8■□□□□ 9.1
SRSF1Q07955 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.617e-8■□□□□ 9.1
SRSF1Q07955 CTCF-203ENST00000566078 1627 ntTSL 225.92■■□□□ 1.744e-7■□□□□ 9.1
SRSF1Q07955 LRRC8D-205ENST00000525774 588 ntTSL 422.69■■□□□ 1.224e-7■□□□□ 9.1
SRSF1Q07955 DCUN1D2-211ENST00000496873 499 ntTSL 321.01■□□□□ 0.954e-7■□□□□ 9.1
SRSF1Q07955 DCUN1D2-203ENST00000438545 1025 ntTSL 520.66■□□□□ 0.94e-7■□□□□ 9.1
SRSF1Q07955 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.684e-7■□□□□ 9.1
SRSF1Q07955 DCAF16-203ENST00000507768 757 ntTSL 218.55■□□□□ 0.564e-7■□□□□ 9.1
SRSF1Q07955 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.53■□□□□ 0.564e-7■□□□□ 9.1
SRSF1Q07955 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.49■□□□□ 0.554e-7■□□□□ 9.1
SRSF1Q07955 DCAF16-202ENST00000507731 533 ntTSL 216.37■□□□□ 0.214e-7■□□□□ 9.1
SRSF1Q07955 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC15.94■□□□□ 0.144e-7■□□□□ 9.1
SRSF1Q07955 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.14e-7■□□□□ 9.1
SRSF1Q07955 RNF43-206ENST00000582293 324 ntTSL 214.97□□□□□ -0.014e-7■□□□□ 9.1
SRSF1Q07955 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.122e-6■□□□□ 9.1
SRSF1Q07955 SLC39A11-209ENST00000580557 794 ntTSL 313.37□□□□□ -0.274e-7■□□□□ 9.1
SRSF1Q07955 TAF1C-223ENST00000570270 597 ntTSL 312.83□□□□□ -0.369e-9■□□□□ 9.1
SRSF1Q07955 MLLT10-207ENST00000430455 184 ntTSL 1 (best)12.75□□□□□ -0.374e-7■□□□□ 9.1
SRSF1Q07955 DCUN1D2-206ENST00000465710 460 ntTSL 312.65□□□□□ -0.384e-7■□□□□ 9.1
SRSF1Q07955 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.414e-7■□□□□ 9.1
SRSF1Q07955 TAF1C-207ENST00000562445 259 ntTSL 312.45□□□□□ -0.429e-9■□□□□ 9.1
SRSF1Q07955 SLC39A11-206ENST00000579491 692 ntTSL 312.39□□□□□ -0.434e-7■□□□□ 9.1
SRSF1Q07955 SLC39A11-213ENST00000582769 567 ntTSL 512.39□□□□□ -0.434e-7■□□□□ 9.1
SRSF1Q07955 SLC39A11-216ENST00000583715 589 ntTSL 511.82□□□□□ -0.524e-7■□□□□ 9.1
SRSF1Q07955 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC11.62□□□□□ -0.554e-7■□□□□ 9.1
SRSF1Q07955 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC11.43□□□□□ -0.584e-7■□□□□ 9.1
SRSF1Q07955 LRRC8D-206ENST00000527156 922 ntTSL 211.41□□□□□ -0.584e-7■□□□□ 9.1
SRSF1Q07955 LRRC8D-207ENST00000532201 597 ntTSL 411.36□□□□□ -0.594e-7■□□□□ 9.1
SRSF1Q07955 MLLT10-209ENST00000462999 344 ntTSL 1 (best)11.34□□□□□ -0.594e-7■□□□□ 9.1
SRSF1Q07955 MLLT10-213ENST00000479634 165 ntTSL 1 (best)11.34□□□□□ -0.594e-7■□□□□ 9.1
SRSF1Q07955 MLLT10-214ENST00000480415 297 ntTSL 1 (best)11.34□□□□□ -0.594e-7■□□□□ 9.1
SRSF1Q07955 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.644e-7■□□□□ 9.1
SRSF1Q07955 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.734e-7■□□□□ 9.1
SRSF1Q07955 DDX17-204ENST00000431312 1853 ntTSL 1 (best)10.4□□□□□ -0.759e-9■□□□□ 9.1
SRSF1Q07955 DCAF16-201ENST00000382247 4548 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.764e-7■□□□□ 9.1
SRSF1Q07955 SLC39A11-205ENST00000579319 439 ntTSL 39.79□□□□□ -0.844e-7■□□□□ 9.1
SRSF1Q07955 PTPN12-216ENST00000523952 500 ntTSL 49.68□□□□□ -0.862e-6■□□□□ 9.1
SRSF1Q07955 SPTBN1-202ENST00000356805 8482 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.874e-7■□□□□ 9.1
SRSF1Q07955 SLC39A11-217ENST00000584129 747 ntTSL 39.28□□□□□ -0.924e-7■□□□□ 9.1
SRSF1Q07955 EIF4A2-223ENST00000494445 629 ntTSL 29.1□□□□□ -0.954e-7■□□□□ 9.1
SRSF1Q07955 DCUN1D2-202ENST00000375403 3164 ntTSL 29.08□□□□□ -0.964e-7■□□□□ 9.1
SRSF1Q07955 DCUN1D2-204ENST00000439909 562 ntTSL 58.84□□□□□ -0.994e-7■□□□□ 9.1
SRSF1Q07955 LRRC8D-203ENST00000414841 666 ntTSL 38.26□□□□□ -1.094e-7■□□□□ 9.1
SRSF1Q07955 SPTBN1-207ENST00000615901 10226 ntTSL 5 BASIC7.47□□□□□ -1.214e-7■□□□□ 9.1
SRSF1Q07955 LRRC8D-202ENST00000394593 3345 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.254e-7■□□□□ 9.1
SRSF1Q07955 SPTBN1-204ENST00000467371 3332 ntTSL 27□□□□□ -1.294e-7■□□□□ 9.1
SRSF1Q07955 MLLT10-212ENST00000476557 490 ntTSL 1 (best)6.26□□□□□ -1.414e-7■□□□□ 9.1
SRSF1Q07955 EIF4A2-225ENST00000496382 460 ntTSL 1 (best)5.7□□□□□ -1.54e-7■□□□□ 9.1
SRSF1Q07955 SLC39A11-211ENST00000581581 386 ntTSL 35.58□□□□□ -1.524e-7■□□□□ 9.1
SRSF1Q07955 EIF4A2-209ENST00000461021 575 ntTSL 25.04□□□□□ -1.64e-7■□□□□ 9.1
SRSF1Q07955 PTPN12-209ENST00000460731 582 ntTSL 24.98□□□□□ -1.612e-6■□□□□ 9.1
SRSF1Q07955 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.11■□□□□ 0.498e-7■□□□□ 9.1
SRSF1Q07955 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.198e-7■□□□□ 9.1
SRSF1Q07955 IST1-218ENST00000541180 635 ntTSL 1 (best)15.81■□□□□ 0.128e-7■□□□□ 9.1
SRSF1Q07955 RBM6-220ENST00000493652 581 ntTSL 215.42■□□□□ 0.068e-7■□□□□ 9.1
SRSF1Q07955 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.028e-7■□□□□ 9.1
SRSF1Q07955 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC14.3□□□□□ -0.128e-7■□□□□ 9.1
SRSF1Q07955 TMEM165-206ENST00000508561 756 ntTSL 513.65□□□□□ -0.228e-7■□□□□ 9.1
SRSF1Q07955 SPAG5-214ENST00000582076 719 ntTSL 313.53□□□□□ -0.248e-7■□□□□ 9.1
SRSF1Q07955 MARCH7-205ENST00000421037 559 ntTSL 413.29□□□□□ -0.288e-7■□□□□ 9.1
SRSF1Q07955 MARCH7-207ENST00000473749 821 ntTSL 312.84□□□□□ -0.358e-7■□□□□ 9.1
SRSF1Q07955 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC11.44□□□□□ -0.588e-7■□□□□ 9.1
SRSF1Q07955 TMEM165-212ENST00000608091 1567 ntTSL 310.7□□□□□ -0.78e-7■□□□□ 9.1
SRSF1Q07955 SPAG5-211ENST00000580676 1023 ntTSL 510.39□□□□□ -0.758e-7■□□□□ 9.1
SRSF1Q07955 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.751e-6■□□□□ 9.1
SRSF1Q07955 TMF1-201ENST00000398559 6849 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.838e-7■□□□□ 9.1
SRSF1Q07955 SPAG5-215ENST00000582175 657 ntTSL 59.84□□□□□ -0.838e-7■□□□□ 9.1
SRSF1Q07955 NGLY1-214ENST00000493324 3058 ntTSL 29.55□□□□□ -0.888e-7■□□□□ 9.1
SRSF1Q07955 TMEM165-210ENST00000514904 1522 ntTSL 29.31□□□□□ -0.928e-7■□□□□ 9.1
SRSF1Q07955 GMPR-203ENST00000543191 675 ntTSL 29.3□□□□□ -0.928e-7■□□□□ 9.1
SRSF1Q07955 MARCH7-209ENST00000539065 3303 ntTSL 2 BASIC9.22□□□□□ -0.938e-7■□□□□ 9.1
SRSF1Q07955 SPAG5-213ENST00000581133 743 ntTSL 38.71□□□□□ -1.028e-7■□□□□ 9.1
SRSF1Q07955 TMF1-203ENST00000488010 3399 ntTSL 57.71□□□□□ -1.188e-7■□□□□ 9.1
SRSF1Q07955 NGLY1-203ENST00000308710 2086 ntTSL 1 (best)7.26□□□□□ -1.258e-7■□□□□ 9.1
SRSF1Q07955 NGLY1-201ENST00000280699 1897 ntTSL 56.45□□□□□ -1.388e-7■□□□□ 9.1
SRSF1Q07955 SPAG5-208ENST00000580377 547 ntTSL 46.22□□□□□ -1.418e-7■□□□□ 9.1
SRSF1Q07955 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.598e-7■□□□□ 9.1
SRSF1Q07955 IST1-209ENST00000536027 823 ntTSL 34.11□□□□□ -1.758e-7■□□□□ 9.1
SRSF1Q07955 TMEM165-207ENST00000509575 570 ntTSL 24.07□□□□□ -1.768e-7■□□□□ 9.1
SRSF1Q07955 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.988e-7■□□□□ 9.1
SRSF1Q07955 HMG20B-209ENST00000470356 806 ntTSL 1 (best)30.1■■■□□ 2.419e-7■□□□□ 9.1
SRSF1Q07955 HMG20B-206ENST00000453933 759 ntTSL 222.23■■□□□ 1.159e-7■□□□□ 9.1
SRSF1Q07955 HMG20B-205ENST00000435022 616 ntTSL 521.72■■□□□ 1.079e-7■□□□□ 9.1
SRSF1Q07955 HMG20B-204ENST00000417382 561 ntTSL 419.55■□□□□ 0.729e-7■□□□□ 9.1
Retrieved 100 of 14,836 protein–RNA pairs in 392.6 ms