RNA–Protein interactions for RNA: ENST00000431312.2

DDX17-204, Transcript of DEAD-box helicase 17, humanhuman

TSL 1 (best)

Gene DDX17, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX17-204ENST00000431312 NISCHQ9Y2I1 1504 aa29.15■■■□□ 2.26
DDX17-204ENST00000431312 CCDC180Q9P1Z9 1646 aa25.41■■□□□ 1.66
DDX17-204ENST00000431312 ZCCHC6Q5VYS8 1495 aaKnown RBP24.55■■□□□ 1.52
DDX17-204ENST00000431312 DCAF1Q9Y4B6 1507 aa24.18■■□□□ 1.46
DDX17-204ENST00000431312 DCAF8L2P0C7V8 631 aa23.87■■□□□ 1.41
DDX17-204ENST00000431312 MYO15BQ96JP2 1530 aa23.82■■□□□ 1.4
DDX17-204ENST00000431312 SHROOM4Q9ULL8 1493 aa23.81■■□□□ 1.4
DDX17-204ENST00000431312 ABCC9O60706 1549 aa23.66■■□□□ 1.38
DDX17-204ENST00000431312 NACADO15069 1562 aa23.58■■□□□ 1.36
DDX17-204ENST00000431312 RB1CC1Q8TDY2 1594 aa23.31■■□□□ 1.32
DDX17-204ENST00000431312 SCRIBQ14160 1630 aa23.28■■□□□ 1.32
DDX17-204ENST00000431312 SUPT5HO00267 1087 aaKnown RBP23.04■■□□□ 1.28
DDX17-204ENST00000431312 UNC13AQ9UPW8 1703 aa22.82■■□□□ 1.24
DDX17-204ENST00000431312 RSF1Q96T23 1441 aaPredicted RBP22.66■■□□□ 1.22
DDX17-204ENST00000431312 CHIC1Q5VXU3 224 aa22.56■■□□□ 1.2
DDX17-204ENST00000431312 CECR2Q9BXF3 1484 aa22.55■■□□□ 1.2
DDX17-204ENST00000431312 BICRAQ9NZM4 1560 aa22.54■■□□□ 1.2
DDX17-204ENST00000431312 BAZ1AQ9NRL2 1556 aaPredicted RBP22.53■■□□□ 1.2
DDX17-204ENST00000431312 MROH2BQ7Z745 1585 aa22.48■■□□□ 1.19
DDX17-204ENST00000431312 SMARCA4P51532 1647 aa22.38■■□□□ 1.17
DDX17-204ENST00000431312 WIZO95785 1651 aa22.32■■□□□ 1.16
DDX17-204ENST00000431312 PABPN1Q86U42 306 aaKnown RBP eCLIP22.3■■□□□ 1.16
DDX17-204ENST00000431312 TOP2AP11388 1531 aaKnown RBP22.16■■□□□ 1.14
DDX17-204ENST00000431312 PEG3Q9GZU2 1588 aa22.12■■□□□ 1.13
DDX17-204ENST00000431312 SMARCA2P51531 1590 aa21.98■■□□□ 1.11
DDX17-204ENST00000431312 ATAD2BQ9ULI0 1458 aa21.92■■□□□ 1.1
DDX17-204ENST00000431312 CCDC88BA6NC98 1476 aa21.88■■□□□ 1.09
DDX17-204ENST00000431312 DNAJC5BQ9UF47 199 aa21.88■■□□□ 1.09
DDX17-204ENST00000431312 EIF4G1Q04637 1599 aaKnown RBP21.85■■□□□ 1.09
DDX17-204ENST00000431312 BAZ1BQ9UIG0 1483 aaKnown RBP21.83■■□□□ 1.09
DDX17-204ENST00000431312 HRCP23327 699 aa21.81■■□□□ 1.08
DDX17-204ENST00000431312 HMGXB3Q12766 1538 aa21.75■■□□□ 1.07
DDX17-204ENST00000431312 NCAPD3P42695 1498 aa21.71■■□□□ 1.07
DDX17-204ENST00000431312 TRIM41Q8WV44 630 aa21.71■■□□□ 1.07
DDX17-204ENST00000431312 LOC105371045A0A1W2PR82 267 aa21.6■■□□□ 1.05
DDX17-204ENST00000431312 PCGF6Q9BYE7 350 aa21.56■■□□□ 1.04
DDX17-204ENST00000431312 TRIM26Q12899 539 aaPredicted RBP21.47■■□□□ 1.03
DDX17-204ENST00000431312 CC2D2AQ9P2K1 1620 aa21.46■■□□□ 1.03
DDX17-204ENST00000431312 ABCC8Q09428 1581 aa21.46■■□□□ 1.03
DDX17-204ENST00000431312 WRNQ14191 1432 aaPredicted RBP eCLIP21.35■■□□□ 1.01
DDX17-204ENST00000431312 PRDM2Q13029 1718 aa21.3■■□□□ 1
DDX17-204ENST00000431312 CFTRP13569 1480 aa21.29■■□□□ 1
DDX17-204ENST00000431312 EEA1Q15075 1411 aa21.26■□□□□ 0.99
DDX17-204ENST00000431312 SYNJ1O43426 1573 aa21.24■□□□□ 0.99
DDX17-204ENST00000431312 FAM9AQ8IZU1 332 aaPredicted RBP21.23■□□□□ 0.99
DDX17-204ENST00000431312 TOP2BQ02880 1626 aa21.19■□□□□ 0.98
DDX17-204ENST00000431312 BIVM-ERCC5R4GMW8 1640 aa21.18■□□□□ 0.98
DDX17-204ENST00000431312 ZEB1P37275 1124 aaPredicted RBP21.15■□□□□ 0.98
DDX17-204ENST00000431312 CADPSQ9ULU8 1353 aa21.15■□□□□ 0.98
DDX17-204ENST00000431312 SOGA1O94964 1423 aa21.09■□□□□ 0.97
DDX17-204ENST00000431312 CUX1P39880 1505 aa21.03■□□□□ 0.96
DDX17-204ENST00000431312 CSRNP3Q8WYN3 585 aa21.01■□□□□ 0.95
DDX17-204ENST00000431312 LAMC3Q9Y6N6 1575 aa20.98■□□□□ 0.95
DDX17-204ENST00000431312 RUSC2Q8N2Y8 1516 aa20.97■□□□□ 0.95
DDX17-204ENST00000431312 PPARGC1BQ86YN6 1023 aaKnown RBP20.97■□□□□ 0.95
DDX17-204ENST00000431312 KIF21BO75037 1637 aa20.94■□□□□ 0.94
DDX17-204ENST00000431312 GOLGA3Q08378 1498 aa20.93■□□□□ 0.94
DDX17-204ENST00000431312 FANCD2Q9BXW9 1451 aa20.93■□□□□ 0.94
DDX17-204ENST00000431312 TNIKQ9UKE5 1360 aa20.92■□□□□ 0.94
DDX17-204ENST00000431312 CEP164Q9UPV0 1460 aa20.91■□□□□ 0.94
DDX17-204ENST00000431312 EHMT2Q96KQ7 1210 aa20.86■□□□□ 0.93
DDX17-204ENST00000431312 DNMBPQ6XZF7 1577 aa20.82■□□□□ 0.92
DDX17-204ENST00000431312 NESP48681 1621 aa20.82■□□□□ 0.92
DDX17-204ENST00000431312 CEP162Q5TB80 1403 aa20.82■□□□□ 0.92
DDX17-204ENST00000431312 KIF27Q86VH2 1401 aa20.82■□□□□ 0.92
DDX17-204ENST00000431312 PDS5BQ9NTI5 1447 aa20.79■□□□□ 0.92
DDX17-204ENST00000431312 ERICH3Q5RHP9 1530 aa20.77■□□□□ 0.92
DDX17-204ENST00000431312 FGD5Q6ZNL6 1462 aa20.77■□□□□ 0.91
DDX17-204ENST00000431312 UBTFP17480 764 aaKnown RBP20.75■□□□□ 0.91
DDX17-204ENST00000431312 TOPBP1Q92547 1522 aa20.73■□□□□ 0.91
DDX17-204ENST00000431312 PRXQ9BXM0 1461 aa20.71■□□□□ 0.91
DDX17-204ENST00000431312 RAPGEF2Q9Y4G8 1499 aa20.68■□□□□ 0.9
DDX17-204ENST00000431312 CUX2O14529 1486 aa20.67■□□□□ 0.9
DDX17-204ENST00000431312 KIF21AQ7Z4S6 1674 aa20.65■□□□□ 0.9
DDX17-204ENST00000431312 URB2Q14146 1524 aaKnown RBP20.63■□□□□ 0.89
DDX17-204ENST00000431312 POLA1P09884 1462 aaPredicted RBP20.63■□□□□ 0.89
DDX17-204ENST00000431312 ABCA10Q8WWZ4 1543 aa20.63■□□□□ 0.89
DDX17-204ENST00000431312 CLIP1P30622 1438 aa20.56■□□□□ 0.88
DDX17-204ENST00000431312 WDR97A6NE52 1622 aa20.56■□□□□ 0.88
DDX17-204ENST00000431312 IGF1RP08069 1367 aa20.55■□□□□ 0.88
DDX17-204ENST00000431312 RAD54L2Q9Y4B4 1467 aa20.52■□□□□ 0.88
DDX17-204ENST00000431312 MRC2Q9UBG0 1479 aa20.5■□□□□ 0.87
DDX17-204ENST00000431312 CUL7Q14999 1698 aa20.49■□□□□ 0.87
DDX17-204ENST00000431312 CARMIL1Q5VZK9 1371 aa20.47■□□□□ 0.87
DDX17-204ENST00000431312 VPS8Q8N3P4 1428 aa20.45■□□□□ 0.86
DDX17-204ENST00000431312 ABCA5Q8WWZ7 1642 aa20.45■□□□□ 0.86
DDX17-204ENST00000431312 TARBP1Q13395 1621 aaKnown RBP20.41■□□□□ 0.86
DDX17-204ENST00000431312 WDR62O43379 1518 aa20.39■□□□□ 0.85
DDX17-204ENST00000431312 CCER1Q8TC90 406 aaPredicted RBP20.39■□□□□ 0.85
DDX17-204ENST00000431312 GAPVD1Q14C86 1478 aa20.36■□□□□ 0.85
DDX17-204ENST00000431312 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.33■□□□□ 0.84
DDX17-204ENST00000431312 ERCC6Q03468 1493 aa20.32■□□□□ 0.84
DDX17-204ENST00000431312 ARAP1Q96P48 1450 aa20.32■□□□□ 0.84
DDX17-204ENST00000431312 IFT140Q96RY7 1462 aa20.3■□□□□ 0.84
DDX17-204ENST00000431312 TDRD9Q8NDG6 1382 aaKnown RBP20.29■□□□□ 0.84
DDX17-204ENST00000431312 CTTNBP2Q8WZ74 1663 aa20.28■□□□□ 0.84
DDX17-204ENST00000431312 PBRM1Q86U86 1689 aa20.27■□□□□ 0.84
DDX17-204ENST00000431312 ARHGAP35Q9NRY4 1499 aa20.27■□□□□ 0.83
DDX17-204ENST00000431312 THOC2Q8NI27 1593 aaKnown RBP20.26■□□□□ 0.83
DDX17-204ENST00000431312 APLP2Q06481 763 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms