RNA–Protein interactions for RNA: ENST00000417382.5

HMG20B-204, Transcript of high mobility group 20B, humanhuman

TSL 4

Gene HMG20B, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-204ENST00000417382 NISCHQ9Y2I1 1504 aa51.54■■■■■ 5.84
HMG20B-204ENST00000417382 CCDC180Q9P1Z9 1646 aa45.87■■■■■ 4.93
HMG20B-204ENST00000417382 ABCC9O60706 1549 aa44.91■■■■■ 4.78
HMG20B-204ENST00000417382 RB1CC1Q8TDY2 1594 aa43.23■■■■■ 4.51
HMG20B-204ENST00000417382 NACADO15069 1562 aa43.2■■■■■ 4.51
HMG20B-204ENST00000417382 MYO15BQ96JP2 1530 aa42.99■■■■■ 4.47
HMG20B-204ENST00000417382 DCAF8L2P0C7V8 631 aa42.96■■■■■ 4.47
HMG20B-204ENST00000417382 ZCCHC6Q5VYS8 1495 aaKnown RBP42.91■■■■■ 4.46
HMG20B-204ENST00000417382 DCAF1Q9Y4B6 1507 aa42.73■■■■■ 4.43
HMG20B-204ENST00000417382 UNC13AQ9UPW8 1703 aa42.12■■■■■ 4.33
HMG20B-204ENST00000417382 PABPN1Q86U42 306 aaKnown RBP eCLIP41.94■■■■■ 4.3
HMG20B-204ENST00000417382 BICRAQ9NZM4 1560 aa41.9■■■■■ 4.3
HMG20B-204ENST00000417382 SCRIBQ14160 1630 aa41.73■■■■■ 4.27
HMG20B-204ENST00000417382 SHROOM4Q9ULL8 1493 aa41.62■■■■■ 4.25
HMG20B-204ENST00000417382 DNAJC5BQ9UF47 199 aa41.35■■■■■ 4.21
HMG20B-204ENST00000417382 EIF4G1Q04637 1599 aaKnown RBP40.82■■■■■ 4.12
HMG20B-204ENST00000417382 CC2D2AQ9P2K1 1620 aa40.64■■■■■ 4.1
HMG20B-204ENST00000417382 CECR2Q9BXF3 1484 aa40.43■■■■■ 4.06
HMG20B-204ENST00000417382 SMARCA4P51532 1647 aa39.98■■■■□ 3.99
HMG20B-204ENST00000417382 BAZ1AQ9NRL2 1556 aaPredicted RBP39.96■■■■□ 3.99
HMG20B-204ENST00000417382 NCAPD3P42695 1498 aa39.88■■■■□ 3.98
HMG20B-204ENST00000417382 ATAD2BQ9ULI0 1458 aa39.83■■■■□ 3.97
HMG20B-204ENST00000417382 SMARCA2P51531 1590 aa39.8■■■■□ 3.96
HMG20B-204ENST00000417382 PEG3Q9GZU2 1588 aa39.68■■■■□ 3.94
HMG20B-204ENST00000417382 MROH2BQ7Z745 1585 aa39.65■■■■□ 3.94
HMG20B-204ENST00000417382 HMGXB3Q12766 1538 aa39.65■■■■□ 3.94
HMG20B-204ENST00000417382 BAZ1BQ9UIG0 1483 aaKnown RBP39.47■■■■□ 3.91
HMG20B-204ENST00000417382 RSF1Q96T23 1441 aaPredicted RBP39.21■■■■□ 3.87
HMG20B-204ENST00000417382 WIZO95785 1651 aa39.17■■■■□ 3.86
HMG20B-204ENST00000417382 TOP2AP11388 1531 aaKnown RBP38.84■■■■□ 3.81
HMG20B-204ENST00000417382 NESP48681 1621 aa38.81■■■■□ 3.8
HMG20B-204ENST00000417382 LAMC3Q9Y6N6 1575 aa38.8■■■■□ 3.8
HMG20B-204ENST00000417382 ERCC6Q03468 1493 aa38.75■■■■□ 3.79
HMG20B-204ENST00000417382 CADPSQ9ULU8 1353 aa38.69■■■■□ 3.78
HMG20B-204ENST00000417382 PDS5BQ9NTI5 1447 aa38.57■■■■□ 3.77
HMG20B-204ENST00000417382 CUX2O14529 1486 aa38.48■■■■□ 3.75
HMG20B-204ENST00000417382 CFTRP13569 1480 aa38.44■■■■□ 3.74
HMG20B-204ENST00000417382 CCDC88BA6NC98 1476 aa38.36■■■■□ 3.73
HMG20B-204ENST00000417382 KIF21AQ7Z4S6 1674 aa38.33■■■■□ 3.73
HMG20B-204ENST00000417382 THOC2Q8NI27 1593 aaKnown RBP38.3■■■■□ 3.72
HMG20B-204ENST00000417382 FANCD2Q9BXW9 1451 aa38.2■■■■□ 3.71
HMG20B-204ENST00000417382 CEP164Q9UPV0 1460 aa38.15■■■■□ 3.7
HMG20B-204ENST00000417382 MRC2Q9UBG0 1479 aa38.15■■■■□ 3.7
HMG20B-204ENST00000417382 WDR62O43379 1518 aa38.04■■■■□ 3.68
HMG20B-204ENST00000417382 PRDM2Q13029 1718 aa38.03■■■■□ 3.68
HMG20B-204ENST00000417382 SUPT5HO00267 1087 aaKnown RBP37.99■■■■□ 3.67
HMG20B-204ENST00000417382 URB2Q14146 1524 aaKnown RBP37.81■■■■□ 3.64
HMG20B-204ENST00000417382 ABCC8Q09428 1581 aa37.65■■■■□ 3.62
HMG20B-204ENST00000417382 TOPBP1Q92547 1522 aa37.56■■■■□ 3.6
HMG20B-204ENST00000417382 DNMBPQ6XZF7 1577 aa37.52■■■■□ 3.6
HMG20B-204ENST00000417382 DNAJC5Q9H3Z4 198 aa37.44■■■■□ 3.58
HMG20B-204ENST00000417382 IFT140Q96RY7 1462 aa37.41■■■■□ 3.58
HMG20B-204ENST00000417382 POLA1P09884 1462 aaPredicted RBP37.24■■■■□ 3.55
HMG20B-204ENST00000417382 CUX1P39880 1505 aa37.22■■■■□ 3.55
HMG20B-204ENST00000417382 ZNF608Q9ULD9 1512 aaPredicted RBP37.16■■■■□ 3.54
HMG20B-204ENST00000417382 TARBP1Q13395 1621 aaKnown RBP37.16■■■■□ 3.54
HMG20B-204ENST00000417382 FGD5Q6ZNL6 1462 aa37.11■■■■□ 3.53
HMG20B-204ENST00000417382 SOGA1O94964 1423 aa37.1■■■■□ 3.53
HMG20B-204ENST00000417382 RAD54L2Q9Y4B4 1467 aa37.03■■■■□ 3.52
HMG20B-204ENST00000417382 EIF4G3O43432 1585 aaKnown RBP37.01■■■■□ 3.52
HMG20B-204ENST00000417382 WDR97A6NE52 1622 aa36.96■■■■□ 3.51
HMG20B-204ENST00000417382 WRNQ14191 1432 aaPredicted RBP eCLIP36.96■■■■□ 3.51
HMG20B-204ENST00000417382 AQRO60306 1485 aaKnown RBP eCLIP36.94■■■■□ 3.51e-7■■■■■ 38.1
HMG20B-204ENST00000417382 TOP2BQ02880 1626 aa36.89■■■■□ 3.5
HMG20B-204ENST00000417382 BIVM-ERCC5R4GMW8 1640 aa36.87■■■■□ 3.49
HMG20B-204ENST00000417382 TDRD9Q8NDG6 1382 aaKnown RBP36.87■■■■□ 3.49
HMG20B-204ENST00000417382 OSCARQ8IYS5 282 aa36.85■■■■□ 3.49
HMG20B-204ENST00000417382 SYNJ1O43426 1573 aa36.82■■■■□ 3.48
HMG20B-204ENST00000417382 ABCA10Q8WWZ4 1543 aa36.81■■■■□ 3.48
HMG20B-204ENST00000417382 GRIN2BQ13224 1484 aa36.7■■■■□ 3.47
HMG20B-204ENST00000417382 GAPVD1Q14C86 1478 aa36.67■■■■□ 3.46
HMG20B-204ENST00000417382 MAGI1Q96QZ7 1491 aaPredicted RBP36.63■■■■□ 3.45
HMG20B-204ENST00000417382 ABCA5Q8WWZ7 1642 aa36.63■■■■□ 3.45
HMG20B-204ENST00000417382 SNAPC4Q5SXM2 1469 aa36.61■■■■□ 3.45
HMG20B-204ENST00000417382 CHD1O14646 1710 aa36.51■■■■□ 3.44
HMG20B-204ENST00000417382 PBRM1Q86U86 1689 aa36.51■■■■□ 3.43
HMG20B-204ENST00000417382 SYNJ2O15056 1496 aa36.49■■■■□ 3.43
HMG20B-204ENST00000417382 FBLN2P98095 1184 aa36.48■■■■□ 3.43
HMG20B-204ENST00000417382 CHMP7Q8WUX9 453 aaPredicted RBP36.45■■■■□ 3.43
HMG20B-204ENST00000417382 ERICH3Q5RHP9 1530 aa36.38■■■■□ 3.41
HMG20B-204ENST00000417382 ADAMTS12P58397 1594 aa36.27■■■■□ 3.4
HMG20B-204ENST00000417382 FHAD1B1AJZ9 1412 aa36.27■■■■□ 3.4
HMG20B-204ENST00000417382 KIF27Q86VH2 1401 aa36.24■■■■□ 3.39
HMG20B-204ENST00000417382 CLASP1Q7Z460 1538 aa36.23■■■■□ 3.39
HMG20B-204ENST00000417382 GRIN2AQ12879 1464 aa36.21■■■■□ 3.39
HMG20B-204ENST00000417382 ARHGEF11O15085 1522 aa36.19■■■■□ 3.38
HMG20B-204ENST00000417382 RIMBP3CA6NJZ7 1639 aa36.17■■■■□ 3.38
HMG20B-204ENST00000417382 RIMBP3BA6NNM3 1639 aa36.17■■■■□ 3.38
HMG20B-204ENST00000417382 RIMBP3Q9UFD9 1639 aa36.17■■■■□ 3.38
HMG20B-204ENST00000417382 IGF1RP08069 1367 aa36.1■■■■□ 3.37
HMG20B-204ENST00000417382 NUP160Q12769 1436 aa36.09■■■■□ 3.37
HMG20B-204ENST00000417382 TRIM41Q8WV44 630 aa36■■■■□ 3.35
HMG20B-204ENST00000417382 CEP170Q5SW79 1584 aa35.98■■■■□ 3.35
HMG20B-204ENST00000417382 CUL7Q14999 1698 aa35.97■■■■□ 3.35
HMG20B-204ENST00000417382 ARAP1Q96P48 1450 aa35.9■■■■□ 3.34
HMG20B-204ENST00000417382 CARMIL1Q5VZK9 1371 aa35.87■■■■□ 3.33
HMG20B-204ENST00000417382 CYB5RLQ6IPT4 315 aa35.84■■■■□ 3.33
HMG20B-204ENST00000417382 SHROOM2Q13796 1616 aa35.8■■■■□ 3.32
HMG20B-204ENST00000417382 RUSC2Q8N2Y8 1516 aa35.74■■■■□ 3.31
HMG20B-204ENST00000417382 KIAA0586Q9BVV6 1533 aa35.72■■■■□ 3.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms